LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa2g04476	ATGGCGGAAGAAATTAGGCAAAACGACGTCGCTTCATCTTCCAAATCTAGAAGCTTCTGGTCTTCACTCCGTTGGATTCCCACTTCCACCGATCACATCATCGCCGCCGAGAAACGCCTTCTCTCCATTATCAAGACTGGGTATGTTCAAGAGCGTGTTAATATAGGCTCTGGACCTCCTGGGTCCAAAGTAAGATGGTTCCGTTCTTCCAGCGATGAGCCGCGGTTTATCAACACGGTTACTTTTGACAGTAAACCGGATTCTCCTACGCTTGTTATGGTTCATGGATATGCTGCTTCCCAGGGTTTCTTCTTTAGGAATTTTGATGCGCTCGCTTCTCGGTTCAGAATCATTGCTGTTGATCAACTTGGTTGGGGAGGATCAAGCAGGCCTGATTTCACATGCAAAAGTACTGAAGAAACTGAGGCATGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAATCTGAGCAATTTCATACTACTTGGACATTCTTTTGGTGGTTATGTTGCTGCGAAATATGCGCTCAAGCACCCTGAGCATGTACAACACTTGATTTTGGTGGGACCAGCTGGGTTTACATCAGAATCAGATGCAAAGACTGATTTTATTGCAAAGTTTCGAGCAACATGGAAGGGAGCAGTTCTGAACCATCTATGGGAATCTAATTTTACGCCTCAAAAGATTGTCAGAGGTTTAGGTCCTTGGGGTCCGAACATGGTGCGCAAATATACAAGTGCTAGGTTTGGTACACATTCAACCGGGCAAAAACTGTTTGAAGAGGAATCAAGTTTGCTAACAGATTATGTTTATCATACATTGGCGGCCAAAGCTAGTGGTGAGCTGTGTTTAAAATATATTTTTGCATTTGGAGCATTTGCTAGGATGCCCCTTCTTCACAGTGCTCCAGATTGGAAGGTGCCGACCACATTCATATATGGTTATGAAGATTGGATGGATTATGAAGGTGCCCAAAAAGCTCGTGCGCAAATGAAAGTTTCTTGTGAAATTATCAGGGTCCCTCAGGCCGGACATTTTGTGTTCATTGACAACCCAAGTGGCTTCCATTCAGCTGTGTTTCATGCTTGTCGAAGGTTTCTTACACCGAATCCGGACAATGAATCTCTTCCTGAAGGACTATCCTCTGCATAG	1158	0.4413	MAEEIRQNDVASSSKSRSFWSSLRWIPTSTDHIIAAEKRLLSIIKTGYVQERVNIGSGPPGSKVRWFRSSSDEPRFINTVTFDSKPDSPTLVMVHGYAASQGFFFRNFDALASRFRIIAVDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFTSESDAKTDFIAKFRATWKGAVLNHLWESNFTPQKIVRGLGPWGPNMVRKYTSARFGTHSTGQKLFEEESSLLTDYVYHTLAAKASGELCLKYIFAFGAFARMPLLHSAPDWKVPTTFIYGYEDWMDYEGAQKARAQMKVSCEIIRVPQAGHFVFIDNPSGFHSAVFHACRRFLTPNPDNESLPEGLSSA	385

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa2g04476	385	SUPERFAMILY	alpha/beta-Hydrolases	79	361	IPR029058	-
	Vifa2g04476	385	PRINTS	Alpha/beta hydrolase fold signature	114	129	IPR000073	-
	Vifa2g04476	385	PRINTS	Alpha/beta hydrolase fold signature	177	190	IPR000073	-
	Vifa2g04476	385	PRINTS	Alpha/beta hydrolase fold signature	163	176	IPR000073	-
	Vifa2g04476	385	PANTHER	RE40534P-RELATED	22	362	-	-
	Vifa2g04476	385	FunFam	Probable 1-acylglycerol-3-phosphate O-acyltransferase	75	365	-	-
	Vifa2g04476	385	Pfam	alpha/beta hydrolase fold	89	354	IPR000073	-
	Vifa2g04476	385	PRINTS	Epoxide hydrolase signature	309	325	IPR000639	GO:0003824
	Vifa2g04476	385	PRINTS	Epoxide hydrolase signature	342	364	IPR000639	GO:0003824
	Vifa2g04476	385	PRINTS	Epoxide hydrolase signature	177	190	IPR000639	GO:0003824
	Vifa2g04476	385	PRINTS	Epoxide hydrolase signature	114	129	IPR000639	GO:0003824
	Vifa2g04476	385	Gene3D	alpha/beta hydrolase	75	369	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa2g04476	Vifa-Chr2	1314189024	1314192319	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa2g04476	2	1314189024	1314192319	Vifa2g04476	2	1314189024	1314192319	ECH
	Vifa3g05143	3	1500634038	1500637678	Vifa2g04476	2	1314189024	1314192319	PCT