Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04452 ATGGCTGATTCAGGTGGTTCTTCTAGGAGAATGTGGTGCTCCATACCAGAACGGTTTCAGCTGCATGGGGCCATGCTGGTCCTCCAAGTTGGTTATGCTGGTTTCCATGTTGTCTCTAGAGCTGCCCTTAACATGGGAATTAGCAAACTGGTTTTTCCGGTTTATCGAAATCTTCTCGCTTTTCTTCTCCTTGTTCCATTTGCATACTTCTTGGAAAAGAAGGAAAGGCCAGCTATTAACTTCAACTTTCTTTTGCACTTCTTCCTTCTTGCCCTTGTCGGTTTTACAGCCAACCAAGGTTTCTACTTGCTTGGCTTGGACAATACATCTCCAACTTTTGCATCAGCTATACAAAACTCAGTTCCAGCCATTACATTTCTCATGGCAGTTATACTCAGAATAGAGCAAGTGAAGTTGAACAGAAAGGATGGAATGGGAAAAGTTGCAGGAACATTATTCTGTGTTGCAGGAGCATCAGTGATAACGCTTTACAAAGGTCCAACAATATACAGTCCAGTTCCACCATCTCTAAACAACAACAACAACAATATCATACAAGAGAGTTTGTTTGAGTCATTGGGTGATGCAAAAGGAAAAAACTGGACCCTTGGATGTTTGTACCTTATAGGACATTGTTTGTCTTGGTCTGGTTGGCTGGTGTTACAAGCACCTGTCCTTAAGAAAAATTCTCAGGCTTGGATTTTCACCTCTGGTAGTGAAGTTCTTACTATCGTGTACGGGGGAGTGGTAGCATCAGGAATTGCATTCGCTGTACAGATATGGTGCATTGACAAAGGAGGACCTGTTTTCGTTGCAGTGTATCAACCTGTTCAAACTCTAATTGTTGCTATTATGGCTTCTCTTGCTTTAGGAGAAGAATTCTACTTGGGAGGGATCATTGGAGCAGCATTGATCATTGTGGGGTTGTACCTAGTTTTGTGGGGCAAAAATGAAGAAAAGAAATTTGCAAGGGAGCTAGCAGCAACAACTTCGACTCCGGAGCATAGTGGCATTATCAGGGCCTCAAGCCATCATGGAAAAGCATCACTCACTCAACCTCTTCTTCCTTCATCAACGGAAAATGTTTGA 1089 0.427 MADSGGSSRRMWCSIPERFQLHGAMLVLQVGYAGFHVVSRAALNMGISKLVFPVYRNLLAFLLLVPFAYFLEKKERPAINFNFLLHFFLLALVGFTANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRIEQVKLNRKDGMGKVAGTLFCVAGASVITLYKGPTIYSPVPPSLNNNNNNIIQESLFESLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKNSQAWIFTSGSEVLTIVYGGVVASGIAFAVQIWCIDKGGPVFVAVYQPVQTLIVAIMASLALGEEFYLGGIIGAALIIVGLYLVLWGKNEEKKFARELAATTSTPEHSGIIRASSHHGKASLTQPLLPSSTENV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04452 362 MobiDBLite consensus disorder prediction 345 362 - -
Vifa2g04452 362 MobiDBLite consensus disorder prediction 342 362 - -
Vifa2g04452 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 318 - -
Vifa2g04452 362 PANTHER WAT1-RELATED PROTEIN 23 228 IPR030184 GO:0016020|GO:0022857
Vifa2g04452 362 Pfam EamA-like transporter family 30 162 IPR000620 GO:0016020
Vifa2g04452 362 Pfam EamA-like transporter family 237 313 IPR000620 GO:0016020
Vifa2g04452 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04452 Vifa-Chr2 1306396629 1306398713 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04452 2 1306396629 1306398713 Vifa2g04452 2 1306396629 1306398713 ECH
Vifa3g05133 3 1494678195 1494680231 Vifa2g04452 2 1306396629 1306398713 PCT