Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04446 ATGGCAGAAGAGGGACAAGTGATCGGTGTTCACAGCGTGGAGGCATGGAAGGAACAGCTCCAGAAGGGAAATGCCTCTAAGAAACTGATTGTGGTTGATTTCACTGCTTCTTGGTGCGGTCCATGCCGTTTCATTGCTCCAATTTTGGCAGAGATTGCTAAAAAGCTTCCACATGTCACCTTCCTTAAGGTTGATGTTGATGAATTGAAGGCTGTTTCCGAGGAGTGGGGAATTGAAGCTATGCCAACATTCCTGTTCTTCAAAGAAGGAAAAGTTGTGGACAAAGTTGTGGGTGCTAAGAAGGAGGAGCTGCTATTGACAATTAACAAGCATGCAGCTGTTGCTAGTGCTTGA 354 0.4576 MAEEGQVIGVHSVEAWKEQLQKGNASKKLIVVDFTASWCGPCRFIAPILAEIAKKLPHVTFLKVDVDELKAVSEEWGIEAMPTFLFFKEGKVVDKVVGAKKEELLLTINKHAAVASA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04446 117 PRINTS Thioredoxin family signature 77 88 - -
Vifa2g04446 117 PRINTS Thioredoxin family signature 30 38 - -
Vifa2g04446 117 PRINTS Thioredoxin family signature 38 47 - -
Vifa2g04446 117 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Vifa2g04446 117 CDD TRX_family 18 105 - -
Vifa2g04446 117 NCBIfam thioredoxin 24 110 IPR005746 GO:0015035
Vifa2g04446 117 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Vifa2g04446 117 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Vifa2g04446 117 FunFam Thioredoxin 6 113 - -
Vifa2g04446 117 PANTHER THIOREDOXIN 7 110 - -
Vifa2g04446 117 Pfam Thioredoxin 10 107 IPR013766 -
Vifa2g04446 117 Gene3D Glutaredoxin 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04446 Vifa-Chr2 1304446363 1304447088 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04446 2 1304446363 1304447088 Vifa2g04446 2 1304446363 1304447088 ECH
Vifa3g05128 3 1493422801 1493423868 Vifa2g04446 2 1304446363 1304447088 PCT