Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04379 ATGTCTCACCGGACTTCCGCTACTTCCCTCTATGTCTCCACCGCTCCTCCCTTCCCGATCTCCAAAGATTTTCAAGGCTCTGACAATCCTATTCCACTTTCACCGCAGTGGCTTCTGCCAAAGCCAGGGGAGGGAAAACCTGGAGCAGGAGTGGAAAGCCATGTCATCTCAACTCCGTCACTTAGCAATCGCTCAGAGGCTGTTAAGACATCTGGAAATGAAGATGTGCAGGACGATCATAAGAGAAAGGATGTCTTTAGGCCATCCGTGCTCGACTCTGAAAGTGGACGTCATGACCGTTGGCGTGATGAAGAGCGGGACACCAAGTTCTCCATACGTCAGGAACGATGGAGGGATGGAGACAAGGTGTCAGGTGATGCTCGGAGAGTGGACCGATGGGCAGATAACCTGTCGGCAAGGAACTTTGGAGAAACACGTCGTAGTACGTCTGATAGATGGAATGATTCAGGTAATAGAGAGGTGAATTTTGATCAGAGGCGTGAGAATAGGTGGACCTCACGTTGGGCTCATGACGAGAAGGAACCTGAAGTTCTTCATGAAAAAAAGAATGACTCTGGTAAAAATAAAAATTGTGATCTGCACCTGGACAAAGGTTCGTCTCACATTTCCAATCCTGGTAAGGATGAAAAGGAAGGGGATCGTTTTTCGCCATGGAGATCTAACTCCTTACAAAGACGTGGAAGGATAGAGCCTTCACAGAACCAGAATGTGACACCCAGCAAACAAGTGCCTATATTTTCTTCTGGGCGGGGCCGCGGGGAGGATACACTTCCAGGGGCTAATCACGGACGTGGCCGCGGGGAGGATACACTTCCAGGGGCTAATCTCGGACGTGGCCGATTTGGCTCTGGGAGCGTGGAGAAGCTCATCCATTTAGATATAGTTCCTCCTTTTACACAAGACGAACCATTGGAGCCTCTAGCTCTCTGTGCACCAACTTCTGAGGAACTGACTGTCTTAGAGGGTATTGACAAAGGGGAAATAGTTAGTAGCAGTGCACCTCCGGTGCCAAAAGATGGAAGGAACTCAACAGAGTTTACACATTCAAGACAAATGAAGCTTGGAAATGCAGCTGTCCAAGATAGAGGTGAAGATGGAGGTTCTTATAAAGTAGCTGATGAAGTGCACAGTAACAGTGAGTCAGCCTTTGAAGAAAATAGTCCTGTTCACCCTGGTACTGGACGGCGTACCACATCGCAGGGTGAACAAGCAAGTAGTCTCATGCATGATAGCAAAAATGTGCCTGGTGATGTCAGTTCAAAAAACTCAGATATGAAGTGGTCACACCAGCCAAAAGATTTTCGTAGTCAGTGGGAAAATAATTTGGACTATTTATCTGACACCAGAGATGTAGCTAAGTGGCAATCTAGTGAAGATTCAATTGTTAAAAGGCAACTACCTGGATATTTGGATGGTGAACTGGAAAGCAGAAGAGTTCCGCAGACTTCTCCAGAGGAGTTATCCCTTTTCTATAAAGATCCTCGAGGTCAAGTTCAAGGTCCATTCAAAGGAGTTGATATTATTGGATGGCTTGAGGCTGGATATTTTGGTATTGATTTACTGGTTCGTCTGGAAAGCGCAGCAGCTGACTCGCCATGGTTGCAACTTGTTGATGTCATGCCCCACTTACGAGCTAAAGCCCGACCACCACCTGGGTTCCCTGTAACAAAACTTGACACTACAGAGGCACCTGTTCGGCAAAATACCAGTACCTTTGTGAATATTCATACTGGGTCGGGTGAGGTTGAGAGGTTGAGAAATAATTCCATGCATAGACTGGGTTCTGCCACTGAAGCTGAAAATAGGTTTTTGGAGTCACTCATGTCTGGTAGCAAGAGCAGTCCCACACTTGGAAACGTGACATTTTCAGAAGGAATACAAGGATTTATTGGAAACAATTCTGGTAATTTGGGCCCTTCTGGAGTTGATGGTGTAAACAACCCATACTTGCTGGCTCAGAGGATGGCACTTGAACGACAGAGATCCTTACCAAATCCTTATCCATACTGGCCAGGGATTGATGCAGCGTCCCTTCTTCCAAAATCAGACGTTGTTCCAGATGCATCACCACATTCAAAACTCATGTCTTCGTTGAGTGACAATTCTCGACAGTTTCAGTCCCAAAATTCTGAGTTGACCTCAGTTATTCAAGGATTATCCGACAGGGCATCCACAGGCTTAAATAATAGTGTTGCCGGCTGGTCAAATTATCCTCTGCAAGCTGGATTGAATCCCCTTCAGAATAATATTGACTCGCGTCATGATCAAAATTTTATACCATTTGGAACTCAACAACAAACATTTCAAGCACCGAACCATTTGTCTTTAAATAACTTAAGAGCTCAAACTGCAGATAACCCATCTAACATTTTGGCAGCAGAGAAGTTGTTTTCTTCCAGTTTGTCCCAGGATCCCCAGATAGTGAATATGTTGCAACAGCAATACTTGCTGCAGATGCATTCACAGGCAACTGCTCCTGCACAGCAGATGCCTTTATTAGATAAACTCCTATTTTTGAAGCAGCAGGAGGAGCAACAACTGTTAATGCACCAACAACAGCAAATGCTTTCTCATATGCTGCAGGGGCACCAGTCTCACCAGCACTTTGGGGGTTTATCTTATGGACAGTTGCAGGGTGGTGGAATACGAATGGGGAATTTGCATGTGGAACCTTCTCAACGTCAACCACCTCTTGAAAATTTTCACATGAGTTCTCAGATACCAGTTCCTAGTGTGCATGATGAGCTTAGTACCAAGTCTTTGAATTTATCTCAGCAAGAAAGCCAAGATACTAGCTATAATAAAAGCACTGAATCTGTGCAGCTGCCTCATCAATTTTTTGGAAATATTAGTCAACATAAAAGTTGGGACACTGCTCTTCCTGAACAAATTAATGAGAAGTACCAGAAGGAAACATTGCCCGCATCAGCTTCTGTTGAAACTTTCCTATTGCATGAGCAGAGTAGAACCACGGAAGAGCCTAATATCACACAGAAACCTTTTTCTGCTTCTGACTGTACTGTTAAATATGTGGAGCAGATATCAGATGACAATGGTAGGACTGATGGTACTCTTCTGAATGCAATTTCTGAGTCTGGTGAGCATTCCAAACCTGCGCTTTGTGTTGCACCTGTTATTGTAGTGTCTTCGGCTGCATCACCACTGGCAGGTCAGGTGGGTTCAAATGTGTCTTCGGCTGCATCACCACTGGCAGGTCAGGTGGGTACCGATGTGGAGGTTAAACCAGATGAGCATCTAGGTGGAAGAGTTGTTTCAAATGTTGAGCCATCTGTGGCAGATGTAAGAGATATTGAACTGCGTGAACCCAAAAAGGCTACTGAGAAGAAATCAAAGAAGCAAAAATCTTCCAAATCCCAATCTTCTGGTCAAGCGAAAGGATTGCTAAAAAATGTAACTTTGCAGAAGTCGAAGAATTCAGAATCTGAAAAGCCAAATTATAGTGAAATCAATTTGAAGGAGGTCAATAGGGAAGAAGATTATGAAACACATCTCAAACAAACAAGCGGCGAGGACAGTGTATCCAGAACTTCTATCACAAATGCAGTTCATCAAGAAGTTAGTGACCTCCCTGCTAATATTCCAGAAAGCATCACTGAGACATATGTTGAGAATGACTCGAAGTCAATTAGTCCTGTTGCCTCCCATAGTACTGAATTGTCTGCAGGGAGAGCTTGGAAGCCTGCTCCTGGTTTCAAGGCGAAGTCTTTATTAGAAATTCAACTGGAAGAGCAGAAAAAGGCACAGACAGAAATACCTGTAATTGAGGCTGCTACTACCGTCAATCCCCTCAGTGTGACTACTCCCTGGGTTGGAGTTGTGGCCAATCCAGACCCTATCAAGGTGTCTAGTCAAAATCATAAAGAAGCAGGCAATACCGAAAATCTGGGAAAAACGAAAACTTCTCAACATAGCAAGAGCAAGAAAAGTCCATTACATGATCTATTGGCAGAAGACATAGAGATTTTTAATGAAAGAGATGGCACAGGTCTAGACAGTATATTATTCTCACAATATATAGCTGCCCATTCAGAACCAATAGATGAAGGAGAATTCATTGAAGCTAAAGACACTAGAAGGAGCCGGAAAAAATCTACAAGATCAAAGGGTTCAGGGTCCAAGATCTCAAAGCCAGTTGCTTCTAATGAAACACCAATAAGTTCAAGTCCCATTGAAAAGGGAAAAAGCTCCCGGTCTGTGCAGCAGGAGAAAGAACTGCCTACCATACCTTCAGGACCCTCTCTGGGAGATTTTGTTCTTTGGAGGGAAGAGCCAACAAGCCCATCTCCTTCTCCAGCTTGGACAATTGATTCCGGTAGGGTTCATAAACCACTGTCATTAAGAGACATTCTAAAGGAACAGGAGAAAAAGTCTTCTGCAGTTCCCCCAAACCAATTTCCTACTCCTCAGAAATCACAGCCTGCCCAAACTGCTCAGAGTAGTGGTCCTTCACGGACAATTTCAGCTCCAACTTCATTAAAAGCTGCATCTTCTAGCCACATAAACTCCGAAGCTTCTCATTCAAAATACAAAGGGGATGATGACATGTTCTGGGGTCCAGTCGAGCAATCTAAGCAAGAAGCTAAACAACTTCTAGGAAAACTTATTACTTCTATGCTGCCTTTGGACACTGTCTCTCTATCCAAGAGCATTTGTGTATTTAGAAGCGATACTAACACATGCAACATTAGGTCAAATTTCTCTCAGCTTGCAAGCCAGGGGAGTTGGGGTTCAAAAAATGTTCCCATGAAAGGTAATTCATCTGGATCATTAAGCCACCAAAAATCAGGGAGTAGCAAACCAACAGAGCGATTGCTGTCATCATCACCCGTCTCTTCTCAATCATCGCTGAAATTAAAAAAAGATGTCATGACTAGGAATTCTGAAGCCATGGACTTCAGAGTTTGGTGTGAGAATGAATGTGTGAGACTTATTGGGACAAAAGATACAAGTTTCCTTGAATTTTGCTCGAAGCAATCAAAATCTGAAGCAGAGATGTTTCTGAAAGAAAATCTTGGATCATATGACCCTGATCATGAATTCATTGACAAATTCCTCGATTACATGGAGTTACTACCTTCCGAAGTTTTGGAAACAGCTTTTCTGGCTCAGAATGATCGGAAAGTTGCTGGAACCGTGTTATCTGGAAATACAAATTTACAGAATCTGGGACAGGCAGATGGTTCCCCCTCAAAAGGTGGAAAGAAAGGTAAGAAAGGGAAAAAGGTCAGCGCCGCAGTTTTGGGATTCAATGTCGTAAGTAACCGGATTATGATGGGTGAGATCCAGACGGTAGAAGACTGA 5343 0.4393 MSHRTSATSLYVSTAPPFPISKDFQGSDNPIPLSPQWLLPKPGEGKPGAGVESHVISTPSLSNRSEAVKTSGNEDVQDDHKRKDVFRPSVLDSESGRHDRWRDEERDTKFSIRQERWRDGDKVSGDARRVDRWADNLSARNFGETRRSTSDRWNDSGNREVNFDQRRENRWTSRWAHDEKEPEVLHEKKNDSGKNKNCDLHLDKGSSHISNPGKDEKEGDRFSPWRSNSLQRRGRIEPSQNQNVTPSKQVPIFSSGRGRGEDTLPGANHGRGRGEDTLPGANLGRGRFGSGSVEKLIHLDIVPPFTQDEPLEPLALCAPTSEELTVLEGIDKGEIVSSSAPPVPKDGRNSTEFTHSRQMKLGNAAVQDRGEDGGSYKVADEVHSNSESAFEENSPVHPGTGRRTTSQGEQASSLMHDSKNVPGDVSSKNSDMKWSHQPKDFRSQWENNLDYLSDTRDVAKWQSSEDSIVKRQLPGYLDGELESRRVPQTSPEELSLFYKDPRGQVQGPFKGVDIIGWLEAGYFGIDLLVRLESAAADSPWLQLVDVMPHLRAKARPPPGFPVTKLDTTEAPVRQNTSTFVNIHTGSGEVERLRNNSMHRLGSATEAENRFLESLMSGSKSSPTLGNVTFSEGIQGFIGNNSGNLGPSGVDGVNNPYLLAQRMALERQRSLPNPYPYWPGIDAASLLPKSDVVPDASPHSKLMSSLSDNSRQFQSQNSELTSVIQGLSDRASTGLNNSVAGWSNYPLQAGLNPLQNNIDSRHDQNFIPFGTQQQTFQAPNHLSLNNLRAQTADNPSNILAAEKLFSSSLSQDPQIVNMLQQQYLLQMHSQATAPAQQMPLLDKLLFLKQQEEQQLLMHQQQQMLSHMLQGHQSHQHFGGLSYGQLQGGGIRMGNLHVEPSQRQPPLENFHMSSQIPVPSVHDELSTKSLNLSQQESQDTSYNKSTESVQLPHQFFGNISQHKSWDTALPEQINEKYQKETLPASASVETFLLHEQSRTTEEPNITQKPFSASDCTVKYVEQISDDNGRTDGTLLNAISESGEHSKPALCVAPVIVVSSAASPLAGQVGSNVSSAASPLAGQVGTDVEVKPDEHLGGRVVSNVEPSVADVRDIELREPKKATEKKSKKQKSSKSQSSGQAKGLLKNVTLQKSKNSESEKPNYSEINLKEVNREEDYETHLKQTSGEDSVSRTSITNAVHQEVSDLPANIPESITETYVENDSKSISPVASHSTELSAGRAWKPAPGFKAKSLLEIQLEEQKKAQTEIPVIEAATTVNPLSVTTPWVGVVANPDPIKVSSQNHKEAGNTENLGKTKTSQHSKSKKSPLHDLLAEDIEIFNERDGTGLDSILFSQYIAAHSEPIDEGEFIEAKDTRRSRKKSTRSKGSGSKISKPVASNETPISSSPIEKGKSSRSVQQEKELPTIPSGPSLGDFVLWREEPTSPSPSPAWTIDSGRVHKPLSLRDILKEQEKKSSAVPPNQFPTPQKSQPAQTAQSSGPSRTISAPTSLKAASSSHINSEASHSKYKGDDDMFWGPVEQSKQEAKQLLGKLITSMLPLDTVSLSKSICVFRSDTNTCNIRSNFSQLASQGSWGSKNVPMKGNSSGSLSHQKSGSSKPTERLLSSSPVSSQSSLKLKKDVMTRNSEAMDFRVWCENECVRLIGTKDTSFLEFCSKQSKSEAEMFLKENLGSYDPDHEFIDKFLDYMELLPSEVLETAFLAQNDRKVAGTVLSGNTNLQNLGQADGSPSKGGKKGKKGKKVSAAVLGFNVVSNRIMMGEIQTVED 1780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1 15 - -
Vifa2g04379 1780 Pfam GYF domain 497 534 IPR003169 GO:0005515
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 917 940 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1471 1518 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 145 223 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1585 1633 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1108 1168 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1384 1421 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1130 1159 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 333 438 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1 289 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1108 1128 - -
Vifa2g04379 1780 CDD GYF 493 550 IPR003169 GO:0005515
Vifa2g04379 1780 SMART gyf_5 494 549 IPR003169 GO:0005515
Vifa2g04379 1780 SUPERFAMILY GYF domain 484 549 IPR035445 -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1733 1753 - -
Vifa2g04379 1780 ProSiteProfiles GYF domain profile. 493 548 IPR003169 GO:0005515
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 71 135 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 55 70 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1364 1523 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1292 1313 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 388 432 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 224 252 - -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1455 1469 - -
Vifa2g04379 1780 Gene3D - 482 567 IPR035445 -
Vifa2g04379 1780 MobiDBLite consensus disorder prediction 1292 1325 - -
Vifa2g04379 1780 PANTHER GYF DOMAIN-CONTAINING PROTEIN 8 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04379 Vifa-Chr2 1287063890 1287072243 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04379 2 1287063890 1287072243 Vifa2g04379 2 1287063890 1287072243 ECH
Vifa3g05029 3 1465031483 1465039859 Vifa2g04379 2 1287063890 1287072243 PCT