Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04358 ATGGAGCTGGTTGTTCGGCGAACTTCATGGTTGAATTGCAAGCTTCTGTTCGTTGTTGTTGTTGTTGAGATCATATTGATATTGGCATTGGTGGAGGCTCACACTGCAAAGCCCCACGAAGGCCAACTTCAATGGGGAGGTTTGGAAAGGAATACAAAGAATATTGCCTCACACTCTTGCATACATGACCAGATTCTTGAACAGAGGAAGCGACCTGGTCGCAAGGTTTATTCAGTTACCCCACAGGTTTATGAGCCTAGTATATTGAAGCTCCTTCAGCATAAAGGTAGAGCAATACTTGCAGTGTCAACATCATTAGGGCCTCAAAAGGATGCAAAAGAACCTATTAGGATATATTTAAATTATGATGCTGTTGGCCACTCCCCTGATAGAGATTGTCGAAAAGTTGGCGCTGTTGTTAAACTTGGGGAGCCTCCCACAACTTCTCTCCCTGGTTCCCCTTCTTGCAATGCTCATGGTAACCCTCCAATTGTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAAGACAAAAAACACCGCCTTCGCAATGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTAGCCGTTGAGCCTGTCAAGGGGAACTTGCGGTTAAGTGGATATTCTGCATGTGGACAAGATGGAGGCGTGCAGCTTCCTCGTGGATATATCGAGGAAGGTGTCCCCGATGCCGACTTAGTTCTTTTGGTCACTACAAGACCTACAACTGGAAATACACTTGCTTGGGCTGTGGCATGTGAACGGGATCAATGGGGCCGCGCTATAGCTGGACATGTGAATGTTGCTCCTCGCCATTTGACTGCCGAGGCTGAGACTTTGCTTTCAGCTACTCTAATACACGAGGTTATGCATGTTCTTGGTTTTGACCCACACGCCTTTGCTCATTTTAGAGATGAAAGAAAAAGACGGCGTGATCAGGTTACCGAACAAGTAATGGATGAAAAGCTTGGACGGATGGTCAATCGAGTGGTGCTTCCTCGTGTTGTCATGCATTCACGATATCATTATGCGGCATTCTCTGGAAATTTTACTGGCTTAGAACTGGAAGATGGGGGAGGACGCGGCACATCAGGGTCTCACTGGGAGAAAAGGCTTCTCATGAATGAGATTATGACCGGTTCTGTGGATACAAGATCTGTAGTTTCAAAAATGACTTTAGCTCTCTTAGAAGATAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCGTCTTGATTGGGGTCGCAACCAAGGTACTGAATTTATTAACTCCCCTTGCAATCTTTGGAAGGGAGCTTATCATTGCAACACAACGCAATATTCTGGCTGTACATATAACAGAGAGGCAGAAGGATACTGCCCAATCCTAACATATAGTGGAGACCTCCCTCAGTGGGCACAATATTTTCCACAAGCTAATAAAGGTGGACAATCCTCACTGGCTGATTATTGTACCTATTTTGTTGCGTACTCTGATGGGTCATGTACAGATACTAATAGTGCACGAGCACCAGATAGAATGCTTGGTGAAGTCAGAGGAAGTAACTCCAGGTGTATGGCCTCATCATTAGTGCGTACAGGATTTGTACGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGATGTATAAACAGTTCTTTAGAGATTGCTGTGGATGGCATCTGGAAAGTGTGTCCTCGTGCTGGTGGACCCATTTTGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCATATTCTGAGCTCTGTAACTCTGACCCAGTATCTATGTCTGGTCAATGTCTCAATTCATGTAATTTCAATGGAGACTGTGTCGATGGAAGGTGCCACTGCTTTCTTGGATTTCATGGGCATGATTGCAGTAGACGTTCCTGCCCCAGAAATTGCAATGGTAAAGGCATGTGCCTTTCAAATGGGTTTTGCGAATGCAAAACTGGCTACACTGGCATCGACTGTTCCACTGCTGTGTGTGATGAACAATGCAGCCTTCATGGTGGAGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTATGCCGGATACACATGCCAGAACAGCTCCATGCTCCTATCTAGTCTCTCTGTTTGCAAAAATGTACTGGGAAATGATGTATCTGGTCAGCATTGTGCACCCAGCGAGCCTAGCATACTACAGCAGTTGGAAGAAGTGGTTGTCATGCCGAACTACCACCGATTATTCCCCGGAGGTGCCAGGAAATTATTTAATATATTTAGCAGCACCTACTGTGATGAGGCTGCTAAACGGCTTGCCTGCTGGATCTCAATCCAGAAGTGTGACAAGGATGGAGATAACAGGCTTCGGGTATGCCATTCCGCATGCCAATCTTATAATATAGCATGTGGAGCTTCACTTGATTGCTCTGACCAAACCCTCTTCAGTAGTGAGGGTGAGGTGGAGGGTCAGTGCACCGGTTTTGGGGAGATGAAACTGTCGTGGTTTGATCGCCTGCGAATCGGTTTTTCTTTGAGAAATAGTTCCTTGAAAGGAATATCCCTAAGATATAGGAAACTTTAA 2571 0.4539 MELVVRRTSWLNCKLLFVVVVVEIILILALVEAHTAKPHEGQLQWGGLERNTKNIASHSCIHDQILEQRKRPGRKVYSVTPQVYEPSILKLLQHKGRAILAVSTSLGPQKDAKEPIRIYLNYDAVGHSPDRDCRKVGAVVKLGEPPTTSLPGSPSCNAHGNPPIVGDCWYNCTSEDISGEDKKHRLRNALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVPDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRDQVTEQVMDEKLGRMVNRVVLPRVVMHSRYHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFINSPCNLWKGAYHCNTTQYSGCTYNREAEGYCPILTYSGDLPQWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINSSLEIAVDGIWKVCPRAGGPILFPGFNGELICPAYSELCNSDPVSMSGQCLNSCNFNGDCVDGRCHCFLGFHGHDCSRRSCPRNCNGKGMCLSNGFCECKTGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGNDVSGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFSSTYCDEAAKRLACWISIQKCDKDGDNRLRVCHSACQSYNIACGASLDCSDQTLFSSEGEVEGQCTGFGEMKLSWFDRLRIGFSLRNSSLKGISLRYRKL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04358 856 Gene3D Leishmanolysin , domain 2 309 434 - -
Vifa2g04358 856 Pfam Leishmanolysin 169 595 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Vifa2g04358 856 Gene3D Leishmanolysin domain 4 498 593 - -
Vifa2g04358 856 FunFam leishmanolysin-like peptidase isoform X2 310 434 - -
Vifa2g04358 856 Gene3D - 109 299 - -
Vifa2g04358 856 FunFam leishmanolysin-like peptidase isoform X2 437 496 - -
Vifa2g04358 856 Gene3D Leishmanolysin domain 3 438 496 - -
Vifa2g04358 856 FunFam leishmanolysin-like isoform X2 498 593 - -
Vifa2g04358 856 ProSitePatterns EGF-like domain signature 1. 651 662 IPR000742 -
Vifa2g04358 856 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 112 599 - -
Vifa2g04358 856 Gene3D Laminin 603 632 - -
Vifa2g04358 856 Gene3D Laminin 634 665 - -
Vifa2g04358 856 ProSitePatterns EGF-like domain signature 2. 651 662 IPR000742 -
Vifa2g04358 856 ProSiteProfiles EGF-like domain profile. 631 663 IPR000742 -
Vifa2g04358 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 397 426 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Vifa2g04358 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 244 273 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Vifa2g04358 856 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 53 816 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Vifa2g04358 856 FunFam Peptidase M8, leishmanolysin 109 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04358 Vifa-Chr2 1281499743 1281507037 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04358 2 1281499743 1281507037 Vifa2g04358 2 1281499743 1281507037 ECH
Vifa3g05008 3 1457320410 1457326999 Vifa2g04358 2 1281499743 1281507037 PCT