Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03599 ATGGAGGATGTTCAAGACAAGTTACCCTCTGACTCCTCTACAAAAATTGCTGAAGAGACATCACTGTCCAAACACGTTGAAGACTTGTTGCCCTCTGAATCTTCTTCAAAAATGACTGAAGAGACACTTATGGAAGAACACGTTGCAAACAAGCTACCCTCGGACTCTACAAAAATTTATGAAGAGACACCACTAGCAGAACATGTTGAAGATATGCTGCCCTCTCAATCTTCTTCAAAAATGACTGAAGAGACACATGCGGAAGAACATGTTGAAGACAAGCTACTCTCTGACTCCTCTACAAAAATTGCTGAAGAGACACCACTGGCAGAACATGTTGAAGACGTGCTGCCTTCTGAATTTTCTTCAAAAAATGCTGAAGAGGTACATTTGGAAGAAGGCGTTGACGACAAGCTACCCTCTGAAACCTCTTCAAAAATTTCTGAAGTGACACCAGTGGCAGAACATGTTGAAGACAATCTACTCTTTAATGGCTCTACAGATATTACTGAGACACCACTTACGGAGCCACTTACGGAGCCCTCTGAAGAAAATACTGTAGTGATAAACCTACCATATAATCAATCTTCCACAGAAATTCCAATTAGTAATGGAGAAGTGAATTCTGGCTCTCACTTAACAGTGCATGAGTTCCCAAAGTTATCAGTGTTGTCAGATGCTTCTGATGGTCACACTATAATACCGGACGAAGATGTTTCTGTAGCTAATTCAGCTTCAATTCCAAATGACAAGGTGGATTTAACAGAAAGAAGCGGCCAGCTAACGTTGGTTGAAGATTCTGGACCAGGTGCTACAGAAGATATCTCTGACAGGCATGAATTGCAGGTTGATGTTACTAATGCTGCTGCTGATAATGAGATTAGACTTTCTGCTTCTTCTGAAACAAATGATTTTTTAAATGATCACAATCAAGTAAAGGTGGCTGTTGGAGCAGTTGACTCACCCTCTCAAACCAAGATGGTTAATATAAAAAGAGGCCTTATTGATACCACACCTCCATTTGAATCTGTCAAGGAAGCTGTTTCTAAGTTTGGAGGAATTGTGGACTGGAAGGCTCATAGAATCCAGACCGTGGAGAGGCGCACTCTAGTTGAACAGGAACTTGATAAAGCAAATGAGGAGATCCCAGAATACAAAAAACAAGCAGAAGCGGCTGAACAGACAAAAGTCCAAGTACTAAAAGAGCTGGACAGCACAAAGAGACTTATAGAAGAGTTAAAGCTTAACCTAGAGAGGGCACAAACCGAGGAGCATCAGGCAAGACAGGACTCGGAACTTGCAAAGCTTAGAGTGGAAGAGATGGAGCAAGGTATTGCAGACGAATCTAGTGTTGCAGCCAAGGCACAACTTGAGGTTGCTAAAGCTAGGTATACAGCAGCCATTTCAGATTTAGCAGCTGTGAAAGAGGAGCTAGAAGCATTGCGCAAGGAATATGCTTCCTTAGTGACTGATAGAGATGAAGCTATTAAGAAAGCCGAGGAGGCAGTTGCAGCATCCAAGGAAGTAGAGAAGTCAGTGGAAGATTTAACTATTGAATTAATCGCCACTAAAGAGTCATTGGAGACTGCTCATGCCGCACACTTGGAAGCAGAGGAACATAGAATAGGAACAGTCATGGCAAGAGATCAAGATTCTCTCAATTGGGAAAAGGAACTTAAACAGGCAGAAGAGGAGCTCCAGAGAATCAATGGGCAAATGTTGTCTGCAAAGGATCTCAAATCCAAACTAGAAACAGCCTCTGGTTTGCTGCTTGATTTGAAAGCTAAATTAACTGCTTATATGGAATCAAAGTTAAAGCAAGAAAGTGATGAAGAGCTTTCACAAGGAGGCCTAGAAGAACCAGGAAAGAAGACACACACTGAAATACAAGCAGCTGTGGAATCAGCCAGAAAGGAACTTGAGGAGGTAAAACTTAACATAGAGAAAGCAAATACGGAGGTTATTTGCTTGAAGCTAGCTGCTACATCTCTAAAATCAGAACTGCAACAAGAAAAATCAAGTCTTGCCTCCATCAAGCAAAGAGAAGGAATGGCCTCCATTGCAGTTGCATCTCTAGAAGCTGAGTTGGATAAGACTAGATCAGAAATAGCTTTGGTACAGATGAAGGAGAGAGAAGCCAAAGAGCAAATGGCTGAACTTCCAAAGAAGCTACAACTAACAGCTGAAGAGGCTAATCAGGCCAACTTGCTTGCTCAAGCAGCCCGTGAAGAACTGCAGAAAATAAATGCAGAAGCAGAACAGGCCAAGGCTGGAGTAAGTACCTTGGAAAGCAGGTTACTTGCTGCTCAAAAGGAGATAGAGGCTGCAAAGGCTTCTGAAAAGTTGGCAATAGCAGCAATTAAAGCATTGCAAGAGAGTGAGTCAAATAGAAGCAAAAATGAAATGGACCCTTCCAGTGGGGTAACACTTTCTTTGGATGAGTACTATGAGCTTAGCAAACGAGCTCACGAGGCAGAAGAGCGAGCCAATATGAGGGTTGCTGCTGCTAATTCTGATGTTGAGAAAGCGAAGGACTCTGAATTGAAATCCTTCGAGAAGTTGGATGAAGTGAATAGAGAGATGGCTGCTAGAAGGGAATCCTTGAAGATGGCAATGGAAAAAGCTGAGAAGGCAAAGGAAGGTAAATTAGGTGTAGAACAAGAACTAAGAAAGTGGAGGGCTGAAAATGAGCAACGGAGAAAGGCTGGCGAGTCTGGTCAAGGAGTAGTTGACCAGAACAAAAGCCCTAGAGCTAGTTTTGAGGGGAGTAAGGAAGCAAATAATTTTGACCGATCCCGAAACACATCAAGTCCGAAGGCTGATATGCATGCAGAAAATGATGAAGGTGGATCGTCACCGGAATCAAAACACGGAAAAAAGAAGAAATCTATGTTCCCACGAGTTTTGATGTTCTTTGCTAGAAGAAAAAAACATTCAAACAAGTCAGGGTAA 2952 0.4234 MEDVQDKLPSDSSTKIAEETSLSKHVEDLLPSESSSKMTEETLMEEHVANKLPSDSTKIYEETPLAEHVEDMLPSQSSSKMTEETHAEEHVEDKLLSDSSTKIAEETPLAEHVEDVLPSEFSSKNAEEVHLEEGVDDKLPSETSSKISEVTPVAEHVEDNLLFNGSTDITETPLTEPLTEPSEENTVVINLPYNQSSTEIPISNGEVNSGSHLTVHEFPKLSVLSDASDGHTIIPDEDVSVANSASIPNDKVDLTERSGQLTLVEDSGPGATEDISDRHELQVDVTNAAADNEIRLSASSETNDFLNDHNQVKVAVGAVDSPSQTKMVNIKRGLIDTTPPFESVKEAVSKFGGIVDWKAHRIQTVERRTLVEQELDKANEEIPEYKKQAEAAEQTKVQVLKELDSTKRLIEELKLNLERAQTEEHQARQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKARYTAAISDLAAVKEELEALRKEYASLVTDRDEAIKKAEEAVAASKEVEKSVEDLTIELIATKESLETAHAAHLEAEEHRIGTVMARDQDSLNWEKELKQAEEELQRINGQMLSAKDLKSKLETASGLLLDLKAKLTAYMESKLKQESDEELSQGGLEEPGKKTHTEIQAAVESARKELEEVKLNIEKANTEVICLKLAATSLKSELQQEKSSLASIKQREGMASIAVASLEAELDKTRSEIALVQMKEREAKEQMAELPKKLQLTAEEANQANLLAQAAREELQKINAEAEQAKAGVSTLESRLLAAQKEIEAAKASEKLAIAAIKALQESESNRSKNEMDPSSGVTLSLDEYYELSKRAHEAEERANMRVAAANSDVEKAKDSELKSFEKLDEVNREMAARRESLKMAMEKAEKAKEGKLGVEQELRKWRAENEQRRKAGESGQGVVDQNKSPRASFEGSKEANNFDRSRNTSSPKADMHAENDEGGSSPESKHGKKKKSMFPRVLMFFARRKKHSNKSG 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03599 983 Coils Coil 464 519 - -
Vifa2g03599 983 MobiDBLite consensus disorder prediction 1 145 - -
Vifa2g03599 983 MobiDBLite consensus disorder prediction 125 143 - -
Vifa2g03599 983 MobiDBLite consensus disorder prediction 606 626 - -
Vifa2g03599 983 Coils Coil 626 681 - -
Vifa2g03599 983 MobiDBLite consensus disorder prediction 82 113 - -
Vifa2g03599 983 Coils Coil 552 596 - -
Vifa2g03599 983 Coils Coil 854 895 - -
Vifa2g03599 983 MobiDBLite consensus disorder prediction 936 959 - -
Vifa2g03599 983 MobiDBLite consensus disorder prediction 868 983 - -
Vifa2g03599 983 MobiDBLite consensus disorder prediction 1 26 - -
Vifa2g03599 983 MobiDBLite consensus disorder prediction 868 904 - -
Vifa2g03599 983 MobiDBLite consensus disorder prediction 908 922 - -
Vifa2g03599 983 Pfam Weak chloroplast movement under blue light 332 899 IPR008545 -
Vifa2g03599 983 Coils Coil 724 779 - -
Vifa2g03599 983 Coils Coil 689 716 - -
Vifa2g03599 983 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 333 973 - -
Vifa2g03599 983 Coils Coil 368 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03599 Vifa-Chr2 1045537926 1045542040 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03599 2 1045537926 1045542040 Vifa2g03599 2 1045537926 1045542040 ECH
Vifa3g04918 3 1428833093 1428836336 Vifa2g03599 2 1045537926 1045542040 PCT