Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02604 ATGGTGGTGATCAGCGAAGAAACCGATCCTTATGCAGAAGAAGGAACAGAAACAGAAATAGAAAGTGTGGACTATGAGGAGCTGAAGAAACGCATGTGGAAGGACAAGATCCTTCTACAAAAATTCAAGGAAAAAGAAGACAACAACACTGAGCCTGAGCAACAAGCGAAACAAGAGGCATCTAGAAGGAAAAAGATGGCAAGAGCACAAGACTCAGTTCTCAAGTACATGGCAAAAATCATGGATGTTTGCAAAGCTAAAGGTTTCGTCTACGGAATCATCCCAGAAAAAGGTAAACCAGTATCAGGTTCCTCGGATAGTTTACGCGAATGGTGGAAAGATCAAATCCGTTTTGATCAAAGCGCGCCTCTCGCGGTCGCGAAATACTTACCACTTCTTGGAAAAGACGAACAGTTTAATACTATGATAGATGATTCAAACACTTACATACACCTCCTTCAAGATTTACAAGATTCAACTCTTGGGTCGGAAATTTGGTGGGGCGAACAAGGTTTATTGGCTCAAGAACAAGGTCCGCCACCTTATAAAAAGCCGCATGATCTTAAAAAAGCATGGAAAGTTTCTGTTTTAGCTGGTGTTATAAAACATATGTCACCTGATTTGGAGAAACTAAGGAGGTTGGTTACTCAGTCTAAGACATTGCAAGATAAGATGACAGCAAGAGATAGTGCTACTTGGTGTAAGGTTATGAACCAAGAAGAAGCTTTGCTTGGTGTGACTAATAAGTGTTTTAAAATGTCGATTTCGGAGGAAGGTGAAAGCTCGGGTGGTAGTAGTAGCAGTAGCAGAAGTGAGAAAAGGAAGTGTGTGTTTGATGTTGGTGGCGATGATGCGGAGTTTCCACAGAATAAATTACCACTGAGTTTTGCAAATTTGCTTGATTGTGAAGCAAGAATTGAAAATAATGATGAATGGTTGAAGATGGGAGATACTGAAGGTGGCAGATTTGGATGGGATGTAGAACATTGGTTGAATGAGGTGGATGATCATGAATTGGAAGCTGCACTTGAAATGGTGAAAGGTAATCACAACATGGATTTTATTCCTCAAAATCCAGCACATAATTTACATGGCCAAGAGGAAGGAGAAAACTCTATTTGGGACTTTAAATATCAATACCATCCAGAATAA 1152 0.4019 MVVISEETDPYAEEGTETEIESVDYEELKKRMWKDKILLQKFKEKEDNNTEPEQQAKQEASRRKKMARAQDSVLKYMAKIMDVCKAKGFVYGIIPEKGKPVSGSSDSLREWWKDQIRFDQSAPLAVAKYLPLLGKDEQFNTMIDDSNTYIHLLQDLQDSTLGSEIWWGEQGLLAQEQGPPPYKKPHDLKKAWKVSVLAGVIKHMSPDLEKLRRLVTQSKTLQDKMTARDSATWCKVMNQEEALLGVTNKCFKMSISEEGESSGGSSSSSRSEKRKCVFDVGGDDAEFPQNKLPLSFANLLDCEARIENNDEWLKMGDTEGGRFGWDVEHWLNEVDDHELEAALEMVKGNHNMDFIPQNPAHNLHGQEEGENSIWDFKYQYHPE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02604 383 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 13 163 IPR006957 GO:0003700|GO:0005634
Vifa2g02604 383 MobiDBLite consensus disorder prediction 43 64 - -
Vifa2g02604 383 Pfam Ethylene insensitive 3 26 163 IPR047091 GO:0003700
Vifa2g02604 383 Pfam Ethylene insensitive 3 162 241 IPR047091 GO:0003700
Vifa2g02604 383 Gene3D - 162 249 IPR023278 GO:0003700|GO:0005634
Vifa2g02604 383 Gene3D - 55 135 IPR023278 GO:0003700|GO:0005634
Vifa2g02604 383 SUPERFAMILY DNA-binding domain of EIN3-like 150 243 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02604 Vifa-Chr2 690691890 690693134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02604 21 244 EIL Transcription Factor Family AT5G65100 52.381 1.81e-89 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vifa2g02604 EIN3 2e-51 No_clan