Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02096 ATGATGATGATGTTTGATGAGATGGGTTTATCTGGGGATATGGATGTGTTTTCTGGTCCCCCAGTTGAGGGGGATATTACCGCCCGGCAAACTGAACCTGGGATGATGGTTGGCGAAGATTACAGTGATGATGAAATGGATATTGATGAGCTTGAGAAGAGGATGTGGAAGTACAAAATGCTTCACAAGCGGTTGAAGGATAAGGAACAAAGCAAGCCGAGGGAAGGATTCGATGCAGCGAAACAGAGGCAATCGCAAGAACAGGCAAGGAGGAAGAAGATGTCGAGGGCTCAAGACGGAATCTTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCTCAAGGGTTTGTTTACGGGATAATTCCCGAGAAAGGGAAGCCTGTGACTGGGGCATCGGATAATCTCCGGGAGTGGTGGAAGGATAAGGTTAGGTTCGATCGGAATGGTCCTGCCGCGATATCCAAGTACCAAGCAGACAATGCGATTCCGGGGAACAACGATGGGAATAACTCAATTGGGCCAACCCCTCACACTTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTGTTATCAGCACTGATGCAACACTGTGATCCTCCTCAGAGGCGGTATCCGTTGGAGAAGGGTGTTTCTCCTCCATGGTGGCCAACTGGGAATGAAGAGTGGTGGCCACATATCGGTTTACCGAAAGATCATGGTCCTCCGCCTTACAAGAAGCCTCATGACCTGAAGAAGGCCTGGAAGGTTGGAGTCCTGACTGCTGTTATCAAGCACATGTCTCCCGACATTGCCAAAATTCGCAAGCTTGTGAGACAGTCCAAATGCCTTCAAGATAAAATGACGGCTAAGGAAAGCGCAACCTGGCTTGCAATCGTCAATCAAGAGGAGTCTTTAGCGCGGGAGCTTTATCCTGATTATATCCCCCCATTTACCTCAGCTGGGGGAAGTGGATCTTTTTCCACCAATGATGGAAATGAGTACGATGTCGATGGGGGAGAAGATGACCCAAATTTTGACGTTGAGGAACGGAAACCTGAGAATCTTCTTCATCCATCCAACATTGGGATGCTGGAGAGAATGAGGGGCGTAAGACTGCCAATTCAGCAGCCTTCTTTCGCAATGAATGGAGATGCTGCAATAAACATGGATTTCATGCGGAAGCGGAAGATCTCTGGCGACTTTAACATGATGATGGATCCGAAAATTTTCACTTGTGAACACCCTCCGTGTCCTTACAGCGAACTTCGTCTCGGTTTTCAGGACAGGACTTCTAGGGACAATCATCAATTGTGTTGTCCATATAGAGCCAGTTTATCAGATTATGGTGGTCCAAGTTTTCATGCTAATGAGGTTAAACCAGTCATATTGCCTCAGTCCTTTGTTCAACTGAAACCTACAGCTCAGTCTGTCAACATGGTTCCACCTTCAGTTGATCTTACCGGACTCGGAGTTTCAGAAGACGAGAATCACAACTTACAGCATCCTAGCAGCATTCTGCAGCAGCAGCAACAGCAGCATCAGAATTTCTACCGCGGTCAAGGAATGGTGATGGAAGGAAGCAACATGTCCCATAATAACCATCATCACATGTTTGCAAGCAATGAAGGTCAATTCAACCGGTTCAGAGCTTTGAATTCCCCCTTTGAGAACAATCACCATCACAACAACAACAACAATCACAATCACAACAGCAACAACACCAATTTCCATTTTATGTTTGGGCCCCCCCACTGTGATCTGTCATCCTTTGATTTTAAGGAGGATAGTCATGGAGTAGGCATGGCTCCTCTGCAGAAACAGCAAGATGTTTCAATATGGTACCAGTGA 1833 0.4681 MMMMFDEMGLSGDMDVFSGPPVEGDITARQTEPGMMVGEDYSDDEMDIDELEKRMWKYKMLHKRLKDKEQSKPREGFDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYQADNAIPGNNDGNNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVSPPWWPTGNEEWWPHIGLPKDHGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEESLARELYPDYIPPFTSAGGSGSFSTNDGNEYDVDGGEDDPNFDVEERKPENLLHPSNIGMLERMRGVRLPIQQPSFAMNGDAAINMDFMRKRKISGDFNMMMDPKIFTCEHPPCPYSELRLGFQDRTSRDNHQLCCPYRASLSDYGGPSFHANEVKPVILPQSFVQLKPTAQSVNMVPPSVDLTGLGVSEDENHNLQHPSSILQQQQQQHQNFYRGQGMVMEGSNMSHNNHHHMFASNEGQFNRFRALNSPFENNHHHNNNNNHNHNSNNTNFHFMFGPPHCDLSSFDFKEDSHGVGMAPLQKQQDVSIWYQ 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02096 610 MobiDBLite consensus disorder prediction 316 343 - -
Vifa2g02096 610 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 31 591 IPR006957 GO:0003700|GO:0005634
Vifa2g02096 610 Pfam Ethylene insensitive 3 49 298 IPR047091 GO:0003700
Vifa2g02096 610 Gene3D - 83 160 IPR023278 GO:0003700|GO:0005634
Vifa2g02096 610 FunFam Ethylene insensitive 3-like 1 83 161 - -
Vifa2g02096 610 FunFam Ethylene insensitive 3-like 1 171 308 - -
Vifa2g02096 610 SUPERFAMILY DNA-binding domain of EIN3-like 177 301 IPR023278 GO:0003700|GO:0005634
Vifa2g02096 610 Gene3D - 175 308 IPR023278 GO:0003700|GO:0005634
Vifa2g02096 610 MobiDBLite consensus disorder prediction 67 95 - -
Vifa2g02096 610 Coils Coil 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02096 Vifa-Chr2 542232581 542234509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02096 3 609 EIL Transcription Factor Family AT3G20770 57.604 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vifa2g02096 EIN3 3.9e-128 No_clan