Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00298 ATGGCTTCACTAATTGCTCCTTCCAAACACTCTCCAATTGAAGATGCAGAAGCTCTCCAAAGAGCTGTTAAAGGTTGGGGAGCTGATGAAAAAGCCATTATAGCAATATTAGGTCATAGAAATGGTACTCAAAGAACTCAAATCAGACAAGCATACTATGACCTCTACCAAGAAGATCTCATCAAACGACTTGAATCAGAGTTATCCGGTGATTTTGAGAGAGCAATGTATAGGTGGATATTGGAACCTGCAGAACGTGAGGCTTTGTTGGCTAATATAGCTATGAAAAATGCGAACATGAACTATCATGTGATTGTGGAAATTTCATGTGTTTCTTCGCCTGATGAGCTTTTTGTCGTGAGACGTGCTTATCATGACCGATATAAACGTTCGATGGAGGAAGATGTGGCTACTAATACCACGGGTCATCTTCGTCAGCTTTTGGTAGGGTTGGTGAGTTCATTTAGGTATGGAGGGAGGGAGGTGAATGCAAGATTAGCACAATCAGAAGCTGATATACTTCATGAGGCTATCAAAAACAAGAATCACAATCATGAAGAAGTCATCAGAATCCTTACAACAAGAAGCAAGACACAACTTGTGGCAACTTTCAATTGCTATAGGCATGACCATGGCATTGCTATCACTAAGAAATTGTTGGATGAAGGATCTGATGACTTTCACAAGGCATTGCGAATAGCTATTAGTTGCATCAATGATCATAAGAAGTACTATGAAAAGGTTCTTCGTAGTGCAATGGAAACAGTTGGAATTGATGAGGATGCACTCACCCGAGTGATCGTTACCAGGGCTGAGAAGGACATGGAAGACATAAAAAAGGTCTTTTACAAGAGAAATACTGTTCATCTTGAGCATGCAGTGGCGGGAAAAACTTCAGGAGACTACAAGAAGTTTCTCCTTACTCTAATGGCAAAAGAAGAATAA 945 0.4032 MASLIAPSKHSPIEDAEALQRAVKGWGADEKAIIAILGHRNGTQRTQIRQAYYDLYQEDLIKRLESELSGDFERAMYRWILEPAEREALLANIAMKNANMNYHVIVEISCVSSPDELFVVRRAYHDRYKRSMEEDVATNTTGHLRQLLVGLVSSFRYGGREVNARLAQSEADILHEAIKNKNHNHEEVIRILTTRSKTQLVATFNCYRHDHGIAITKKLLDEGSDDFHKALRIAISCINDHKKYYEKVLRSAMETVGIDEDALTRVIVTRAEKDMEDIKKVFYKRNTVHLEHAVAGKTSGDYKKFLLTLMAKEE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00298 314 ProSiteProfiles Annexin repeat profile. 165 236 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 FunFam Annexin 1 81 - -
Vifa2g00298 314 Gene3D Annexin 2 81 IPR037104 GO:0005509|GO:0005544
Vifa2g00298 314 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Vifa2g00298 314 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Vifa2g00298 314 PRINTS Annexin family signature 173 199 IPR001464 GO:0005509|GO:0005544
Vifa2g00298 314 PRINTS Annexin family signature 297 310 IPR001464 GO:0005509|GO:0005544
Vifa2g00298 314 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Vifa2g00298 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Vifa2g00298 314 ProSiteProfiles Annexin repeat profile. 240 311 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 Gene3D Annexin 165 239 IPR037104 GO:0005509|GO:0005544
Vifa2g00298 314 Gene3D Annexin 82 152 IPR037104 GO:0005509|GO:0005544
Vifa2g00298 314 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 SUPERFAMILY Annexin 7 311 IPR037104 GO:0005509|GO:0005544
Vifa2g00298 314 Gene3D Annexin 242 311 IPR037104 GO:0005509|GO:0005544
Vifa2g00298 314 PANTHER ANNEXIN 12 309 - -
Vifa2g00298 314 FunFam Annexin 82 152 - -
Vifa2g00298 314 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 SMART annex3 182 235 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 SMART annex3 257 309 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 FunFam Annexin 165 239 - -
Vifa2g00298 314 PRINTS Plant annexin signature 118 132 IPR009118 -
Vifa2g00298 314 PRINTS Plant annexin signature 225 243 IPR009118 -
Vifa2g00298 314 PRINTS Plant annexin signature 160 180 IPR009118 -
Vifa2g00298 314 Pfam Annexin 90 151 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 Pfam Annexin 170 231 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 Pfam Annexin 247 309 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Vifa2g00298 314 FunFam Annexin 241 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00298 Vifa-Chr2 48869041 48870704 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00298 2 48869041 48870704 Vifa2g00298 2 48869041 48870704 ECH
Vifa2g00298 2 48869041 48870704 Vifa4g00829 4 245950257 245951844 PCT