Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00230 ATGGGTGGAGGTGAAGATCTTGTAAACAATGCAGCTAGTGCTGCTGGGAATCCCATTGTCCACGCCACTGGTACTACAGAAGATCCTATAAATGACAGAGGAGATTTCTCAAAAAAGGTTGAAAACATCAAAGCGGTTGATGTGGAAAGTCCTACAAATGACCTACCAAATCATGCAGTAAATCATGTTAGCAGCAAAGAAATTGGTTCAGAAAATCCTGCTAATGTTAAACCAAATGACTCACTAAATCCTTTAAATGACCAAGCAGGTGGTTCAGAAAATCCAGTAATTGTCCAAGCAAATGTTTCAGAAACCCGTAGAAATGAAGCAGGTGGTACAGAAACAGGTAATCCTATAAATGACCAATTAAATGGTGCGGAAAATCCTGCAAACAACCAAGCAGGTGGCGCAGAAACAAAAACTCCTATGAATGACCAGTTAAATATTGCGAAGACTTCTGTGAATGACCAAGCAGGTGGTGGAGGCAAAATCCTTGTTCACAATGAAGCAGTTGCTATAGAAAATCCTTTAGTTGACAAACAAGATGGTGTGGAAAATCTTGTAGAAGAGAAAGCAGATGCCACTGAAGTCCCGTCAAACATCAAAGATACTGTTGAAACCCCTGTAAGCAACAAAATAGACCGTCTTCCAGCAGAAGCAAAGGAGATACTGATATCATTGGCAAGTAAATGGGAGGATGTACTAGATGCAAGTGCATTGCAGGTGATCCCTCTCAAGGGGGCAATGACAAATGAGGTATTCCAAATAAAGTGGCCAGCTACAAGTGGGGAAACTTCACGGAAGGTTGTAGTTAGAATCTACGGTGAGGGTGTGGACATTTTCTTTGATAGGGAGAATGAAATACGGACATTTGAATACATGTCAAGAAATGGTCAAGGGCCTCTTCTACTAGGCCGTTTTACAAATGGACGCGTTGAAGAGTTTATCCATGCACGGACATTGTCAGCTTCTGACCTACGTGATCCATCAATATCTGCTCTTATAGCAGCCAAAATGAAGGAGTTTCATGATCTAGATATGCCGGGTGAAAAGAAAGTCAATCTTTGGCGTACATTGAGAAATTGGCTTACTGAGGCCAAACGTTTGTCTTCTCCAAAGGAAGTTGAAGCTTTTTATTTGGACACAGTCGACAAGGAAATCTCTATTTTGGAAAAGGAACTATCCGGCGCACACCAACAGATAGGATTTTGCCACAATGATTTACAATATGGTAACATAATGCTTGATGAAGAGAACAATTCTGTGACCATAATAGACTATGAATATGCAAGTCACAATCCTGTAGCATATGATATAGCAAACCACTTCTGTGAGATGGCTGCGAACTATCATACAGAAACGCCTCATGTTCTTGATTACAGCAATTATCCTGATTTTGAGGAGCGTGAGAGATTTATTAAGGCATATTTGCGTACCTCAGGTGAAGAACCAAGTGAGGGTGAAGTGGAGCACCTACTTCAAGAAGTTGAGAAATATACACTTGCAAATCATCTATTCTGGGGCCTTTGGGGAATAATTTCGGGACAAGTAAACACAATTGAATTTGATTACAAGGAGTATGCGAAACAGAGGTTTCAAGAGTATTGGGCAAGGAAACCTTATCTTCTGAGCTCTGATGCACCTTCTCCTTTTAATGTCCCTGAGGGAACAGGAGAGCTTGCGTCGGGAGGGCACACTAAAGGGAAGAACACTGGTATCTTCAGGAAGATGAAGAGAGTTTTGGGTCTTGGCTTGTTCAGGTCGAAAAGCTAA 1773 0.414 MGGGEDLVNNAASAAGNPIVHATGTTEDPINDRGDFSKKVENIKAVDVESPTNDLPNHAVNHVSSKEIGSENPANVKPNDSLNPLNDQAGGSENPVIVQANVSETRRNEAGGTETGNPINDQLNGAENPANNQAGGAETKTPMNDQLNIAKTSVNDQAGGGGKILVHNEAVAIENPLVDKQDGVENLVEEKADATEVPSNIKDTVETPVSNKIDRLPAEAKEILISLASKWEDVLDASALQVIPLKGAMTNEVFQIKWPATSGETSRKVVVRIYGEGVDIFFDRENEIRTFEYMSRNGQGPLLLGRFTNGRVEEFIHARTLSASDLRDPSISALIAAKMKEFHDLDMPGEKKVNLWRTLRNWLTEAKRLSSPKEVEAFYLDTVDKEISILEKELSGAHQQIGFCHNDLQYGNIMLDEENNSVTIIDYEYASHNPVAYDIANHFCEMAANYHTETPHVLDYSNYPDFEERERFIKAYLRTSGEEPSEGEVEHLLQEVEKYTLANHLFWGLWGIISGQVNTIEFDYKEYAKQRFQEYWARKPYLLSSDAPSPFNVPEGTGELASGGHTKGKNTGIFRKMKRVLGLGLFRSKS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00230 590 Pfam Choline/ethanolamine kinase 266 467 - -
Vifa2g00230 590 Gene3D Phosphorylase Kinase; domain 1 229 315 - -
Vifa2g00230 590 PANTHER CHOLINE/ETHANOALAMINE KINASE 206 545 - -
Vifa2g00230 590 Gene3D - 275 536 - -
Vifa2g00230 590 Coils Coil 380 400 - -
Vifa2g00230 590 MobiDBLite consensus disorder prediction 65 141 - -
Vifa2g00230 590 MobiDBLite consensus disorder prediction 1 35 - -
Vifa2g00230 590 CDD ETNK_euk 240 538 - -
Vifa2g00230 590 SUPERFAMILY Protein kinase-like (PK-like) 203 542 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00230 Vifa-Chr2 31991811 31995373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00230 206 545 Acyl Lipid Metabolism Gene Families AT1G74320 67.941 8.88e-178 504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00230 2 31991811 31995373 Vifa2g00230 2 31991811 31995373 ECH
Vifa2g00230 2 31991811 31995373 Vifa4g00535 4 148708603 148712301 PCT