Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09366 ATGGTTTCAGCTACTTCTTCTCCCCCTTCTAAGGAGGAAGTAGAGACAGATCAAAAATGGGTGGACAATGGACACGCTCGCAGTGCAAAATGGTGGTACTCAACTTTCCACACCGTGACAGCCATGATAGGTGCAGGTGTTCTCAGCCTTCCGTATGCCATGGCATATCTAGGATGGATTCCAGGGACTTTGATGTTGTTGTTATCATGGGGCCTAACCTTAAACACAATGTGGCAGATGATTCAGCTCCATGAGTGTGTTCCGGGTACCCGATTTGATCGTTATGTGGATCTTGGTAAACATGCTTTTGGACCAAAACTTGGACCATGGATTGTGCTGCCACAGCAATTAATTGTTCAAATTGGATGTAATATTGTGTACATGGTCATTGGAGGGAAGTGTCTAAAGAAGTTCATGGAGATTGCATGCACCAATTGCACACAACTCAAACAGTCCTACTGGATTTTGATTTTTGGTTCCATTCATTTCTTTCTCTCTCAGCTTCCCAATTTCAATTCTGTTGCTTCTGTTTCTTTAGCAGCAGCTGTCATGTCATTGAGCTATTCAACTATAGCGTGGGTGGCTTGCTTGTCCAGAGGTAGGATTGAGAATGTGAGCTATTCATACAGGCAAACAAGCACAAGTGACTTAATATTCCGAATTTTCAACGCACTTGGTCAGATTTCATTTGCATTTGCTGGGCATGCAGTAGCCCTTGAAATTCAGGCAACAATTCCATCAACACCTGAAAAACCATCAAGAATACCAATGTGGAAAGGTGCTATTGGTGCCTATATCATAAATGCAATATGCTATTTCCCAGTTGCACTTATTGGATATTGGGCATTTGGAAGAGATGTTGATGATAATGTTCTTATGTCACTAGAAAGACCTGCTTGGCTCATTGCCTCCGCTAACTTGATGGTATTCATTCATGTTGTTGGTAGTTATCAGGTTTATGCTATGCCTGTTTTTGATTTGATTGAGACAATGATGATCAAAAGCTGGAGTTTCCCGCCAGGATTGCCTCTCAGACTTGTTGCTAGATCTTCTTTTGTAGCATTTACACTTACTATAGGGGTTACATTCCCTTTCTTTGGCGATCTTCTTGGGTTCTTTGGTGGATTTGGTTTTGCTCCTACTTCATATTTTCTTCCGAGTATAATGTGGCTAATAATCAAGAAACCCAAGAGATTTAGCATCAACTGGTTCATCAATTGGGCTGCAATATGCATTGGTGTGTGCATTATGCTGGCATCCACGGTTGGTGGCTTCAGGAATATCATTGCTGATGCTTCAACTTATAAATTCTACACCTAA 1320 0.4159 MVSATSSPPSKEEVETDQKWVDNGHARSAKWWYSTFHTVTAMIGAGVLSLPYAMAYLGWIPGTLMLLLSWGLTLNTMWQMIQLHECVPGTRFDRYVDLGKHAFGPKLGPWIVLPQQLIVQIGCNIVYMVIGGKCLKKFMEIACTNCTQLKQSYWILIFGSIHFFLSQLPNFNSVASVSLAAAVMSLSYSTIAWVACLSRGRIENVSYSYRQTSTSDLIFRIFNALGQISFAFAGHAVALEIQATIPSTPEKPSRIPMWKGAIGAYIINAICYFPVALIGYWAFGRDVDDNVLMSLERPAWLIASANLMVFIHVVGSYQVYAMPVFDLIETMMIKSWSFPPGLPLRLVARSSFVAFTLTIGVTFPFFGDLLGFFGGFGFAPTSYFLPSIMWLIIKKPKRFSINWFINWAAICIGVCIMLASTVGGFRNIIADASTYKFYT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09366 439 FunFam Lysine histidine transporter 1 24 434 - -
Vifa1g09366 439 Pfam Transmembrane amino acid transporter protein 28 423 IPR013057 -
Vifa1g09366 439 PANTHER OS05G0424000 PROTEIN-RELATED 29 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09366 Vifa-Chr1 1480184190 1480186554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09366 10 438 Organic Solute Cotransporters AT1G25530 74.126 0.0 655
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09366 1 1480184190 1480186554 Vifa1g09366 1 1480184190 1480186554 ECH