Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09230 ATGACTCTCCCCTTCTTTCTCTTCTTCTTCTTCATACTCGCCACAGTTTCCACCGCCCTTCCATACGGTATCTCCTACCACATTGACTGTGGCACTCCAACCAACACCACCGACTCCTTCAACACAACCTGGCTCTCTGACCGCTTCTTCACCGGAGGTACTACCGGGATCGTCTCTGAGCCTCTCCACTTCCACCACCACCACGAAAAAACTCTCCGCTTCTTCCCCATTTCATCCGGCAAGAAGAACTGCTACACCGTCCCTTTACTCTCCACTTCCTCACGCTACCTCATCCGCACCTTCGTTGTCTATGACAACTACGACGGCAAGTCTCACCCTCCCTCCTTCGACGTTTCCGTCTCTGGCACCGTCGTCTTCTCCTGGCGTTCTCCATGGCCTCAATCCCTCGCTCGTGACGGTGCCTATGCTGACCTATTCGCTTCCTTCCAAGACCAAGCCCTAATCTGCTTCTACAGCTTCGCCACCGATCCTCCCGTCGTTTCCTCGCTTGAGCTCTTTCCCGTCGATCCCGCTTCTTACGATTCCGCTTCCGTTGCCAACAATCATACCATACTTGTTAACTATGGTCGACTCTCTTGCGGCTCTAACCAGTGGGGTCCCGGCTTCACCAACGATGCGGACAGCTTCGGAAGGTCCTGGCAGCCCGATTCCGTCCATCGAACCGGAGTCACCGGCCGGCACAAGGTACTTGCGGTATCCACCAAAAGTAGCATTGTGGGAGCTGATCAGAAGCCCAATTACTTCCCAACCAAGCTGTACCAAACCGCGGCAACTACAGCTGAGACTGCCGAGGAGGGCGGTGGCGTGTTGGAATACGAATTGAACGTGGATGCTAAATTGGATTACCTTGTGTGGCTGCATTTTGCTGAGATCGAGGATAGGGTGAGGAAGGCTGGAGAAAGGGTGTTTGATGTGTTCATCAATGGTGACAATCTGACAAGAGTGGATATTTACAAGCAAGTGGGAGTTTTAGCTGCCTTTACTTGGCATCACACGGTGAAGAATTTGAGTAGCAGCTCCTTGAGTGTGAAGCTTGTTGGAGTTGTGGGTGCACCTCTCATTTCTGGGATTGAGAATTATGCTTTGGTCTCGGCAGATCCTTCTACCCTTCCTCACCAAGTGATTGCCATGAAAGCATTGAAGGATTCTCTTCGGGTTCCTGAAAGAATGGGTTGGAATGGTGATCCTTGTGCTCCTACTAATTGGGATGCTTGGGAGGGAGTTACCTGCCGCTTGAGTAAGGATAATACTGCTCTTGTCATAAGTCAAATAGATCTGGGCAGTCAAGGCTTGAAAGGGTTCATAAGCGACCAAATTAGTCTTTTGTCGGACTTGGTAAGCCTGAACTTGAGCTCTAATTTGTTGGTGGGTGAAGTACCGTCTGGCCTCAGTCAAAAATCCTTGATACACCTGGACTTGTCCAACAATCAATTAACAGGCTCAATTCCAGATAGTTTAGCTTCTTCAAGTTTGCAGCTTGTGCTATTGAATGGCAACTTACTGGAAGGGCAAGTGCCGGATGAACTCTATTCTATTGGTGTGCATGGTGGAGCTATTGACCTCTCCAGCAACAAAGGTTTGTGCGGTGTACCATCTCTGCCAGCTTGTCCTATGTTTTGGAAGAATGGCAGATTATCTACTGAGGGAAAACTTGCTATAGGCTTGTCTAGTCTTTTTGTTTTCTGTTTTATACTACTGCTGGTCTATATCTATATCAGGAGGAGAAGGAATGATTATGACTTTGCTCTGCCTCATGAATTGACAGCATTAGCCGCCAAGAGAAACCGATATCAGAGGCAAAAATCCTTGATGGTTCTTGAGATGGAGAGTCAACACGCAAGGGGACAACCTTCACCTTCTGCCATACAATAA 1893 0.4902 MTLPFFLFFFFILATVSTALPYGISYHIDCGTPTNTTDSFNTTWLSDRFFTGGTTGIVSEPLHFHHHHEKTLRFFPISSGKKNCYTVPLLSTSSRYLIRTFVVYDNYDGKSHPPSFDVSVSGTVVFSWRSPWPQSLARDGAYADLFASFQDQALICFYSFATDPPVVSSLELFPVDPASYDSASVANNHTILVNYGRLSCGSNQWGPGFTNDADSFGRSWQPDSVHRTGVTGRHKVLAVSTKSSIVGADQKPNYFPTKLYQTAATTAETAEEGGGVLEYELNVDAKLDYLVWLHFAEIEDRVRKAGERVFDVFINGDNLTRVDIYKQVGVLAAFTWHHTVKNLSSSSLSVKLVGVVGAPLISGIENYALVSADPSTLPHQVIAMKALKDSLRVPERMGWNGDPCAPTNWDAWEGVTCRLSKDNTALVISQIDLGSQGLKGFISDQISLLSDLVSLNLSSNLLVGEVPSGLSQKSLIHLDLSNNQLTGSIPDSLASSSLQLVLLNGNLLEGQVPDELYSIGVHGGAIDLSSNKGLCGVPSLPACPMFWKNGRLSTEGKLAIGLSSLFVFCFILLLVYIYIRRRRNDYDFALPHELTALAAKRNRYQRQKSLMVLEMESQHARGQPSPSAIQ 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09230 630 Gene3D - 196 369 - -
Vifa1g09230 630 Gene3D Ribonuclease Inhibitor 381 545 IPR032675 -
Vifa1g09230 630 ProSiteProfiles Leucine-rich repeat profile. 474 496 IPR001611 GO:0005515
Vifa1g09230 630 FunFam Di-glucose binding protein with Leucine-rich repeat domain 197 367 - -
Vifa1g09230 630 FunFam Putative LRR receptor-like serine/threonine-protein kinase 378 544 - -
Vifa1g09230 630 PANTHER OS07G0107800 PROTEIN-RELATED 27 599 - -
Vifa1g09230 630 SUPERFAMILY L domain-like 376 519 - -
Vifa1g09230 630 Pfam Malectin-like domain 28 368 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09230 Vifa-Chr1 1461059400 1461076313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09230 28 497 Receptor kinase-like Gene Family AT1G05700 30.567 7.12e-39 151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09230 1 1461059400 1461076313 Vifa1g09230 1 1461059400 1461076313 ECH