Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09176 ATGGCTTCCACAAAGGGAAATGATGAGCATGAGCCACAAAGAAGCTATTGGAGATGCAGCAAACAAGATTTCTTTCCCGAGGAATCCTTTCAAAGCTGGCACAACTATGGTTCTGCTCTTTCACAAACATGGTTAAGGTTCAAGGACCGTGTTTCGACCAGATCGGACGATGCAACTGAGACAGAAGTGCTTAAGAAACAAAGTGAGAATGAAATGAAAAAATGTCTCAACTGGTGGGACCTGATCTGGTTTGGCTTTGGTGCAGTGATTGGTGCAGGAATCTTTGTGTTAACTGGTCAAGAAGCTCATAACCATGCTGGTGCGGCAATAGTCTTATCCTATGCAGCTTCAGGAATTTCAGCAATGCTTTCTGTTTTCTGTTACACAGAATTCGCCGTCGAAGTTCCAGCTGCAGGTGGTTCTTTTGCTTACCTAAGAATTGAATTAGGTGATTTTGTTGCTTTCATAGCAGCCGGTAACATACTTCTCGAGTGCGTGCTTGGAGGGGCAGCAGTATCTAGATCATGGACCTCTTATTTCACAAGCCTTTTGAATCGTCCGAAAGATTCGTTTCGAATCAAAGCACATCATCTCAAAGACGGATACAATTTACTTGACCCTATAGCAGTTGTTGTTCTTTTAACCGCCGGAACAATCGCAATGATCAGCACAAGAAAAACTTCGCTTCTGAATTGGATTGCATCGGCAATCAACACGGCTGTAATCATATTCGTAATCATTGCCGGGTTTCTTCACGCAGATACATCGAATTTGAAGCCTTTTTTACCTTATGGAGCTAAAGGTGTATTTCAAGCATCTGCAATTCTTTATTTTGCTTATGGAGGTTTTGAAAGTCTTGCAACAATGGCTGAAGAAACTAAAAATCCACCAAAGGATATACCAATAGGTTTAATCGGTTCAATGACAGTGATCATAGTGGTTTATTGTTTGATGGCACTTTCATTAAGCATGATGCAGAAATACACAGACATCGATACGGGTGCGGCTTTTTCAATTGCATTTGAGAAAGTAGGAATGAATTGGGCAAAATATGTAGTCGCTTTCGGTGCATTGAAGGGTATGACAACAGTTCTTTTAGTAGGAAGATTAGGACAGGCGCGTTACATCGTTCACATCGCGCGTTCGCACATGATTCCTCCTTGGTTTGCTCTTGTTCATCCCAAAACAGGAACACCTATAAACGCAACACTTCTGATCACAATTACAAGCGCTTGCGTAGCCTTTTTCACTAGCTTGGACGTGTTATCGAGTTTGATATCAGTAAGTACACTTTTCGTTTTCGTTTTGATATCGACTGCGCTTCTGGTAAGAAGGTACTATGTTAGAGGAGTCACAACAAAAGAGAATCAGTTAAAGCTAGTTACGTTTTTGTTTCTCATTGTTGGTTCTTCAATCGGAACTTCAGCTTATTGGGGATTGAGGCCTAATGGTTGGATTGGATATACTGTTACTGTTCCTGTTTGGTTTTTTTCGACTCTTGGGATGTCGTTTTTTTTGACTCAACAAAGGAAACCAAGATTTTGGGGAGTTCCACTTGTTCCATGGTTGCCATCTTGTTCAATCGCAACAACTGTTTTTCTCATGGGATCTTTGGAATATGATGCTTTTGTGAGATTTGCAATATGCACTTTGGTTATGTTGGTTTACTATGTTTTCTTTGGTCTTCATTCAACTTATGATATGGCTCATCTACAAGAGAAGGTGCAAAATATCAATGTGGATCACAAAGAGACTGCTAGGATTGAAGGGCCTTGA 1776 0.4082 MASTKGNDEHEPQRSYWRCSKQDFFPEESFQSWHNYGSALSQTWLRFKDRVSTRSDDATETEVLKKQSENEMKKCLNWWDLIWFGFGAVIGAGIFVLTGQEAHNHAGAAIVLSYAASGISAMLSVFCYTEFAVEVPAAGGSFAYLRIELGDFVAFIAAGNILLECVLGGAAVSRSWTSYFTSLLNRPKDSFRIKAHHLKDGYNLLDPIAVVVLLTAGTIAMISTRKTSLLNWIASAINTAVIIFVIIAGFLHADTSNLKPFLPYGAKGVFQASAILYFAYGGFESLATMAEETKNPPKDIPIGLIGSMTVIIVVYCLMALSLSMMQKYTDIDTGAAFSIAFEKVGMNWAKYVVAFGALKGMTTVLLVGRLGQARYIVHIARSHMIPPWFALVHPKTGTPINATLLITITSACVAFFTSLDVLSSLISVSTLFVFVLISTALLVRRYYVRGVTTKENQLKLVTFLFLIVGSSIGTSAYWGLRPNGWIGYTVTVPVWFFSTLGMSFFLTQQRKPRFWGVPLVPWLPSCSIATTVFLMGSLEYDAFVRFAICTLVMLVYYVFFGLHSTYDMAHLQEKVQNINVDHKETARIEGP 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09176 591 PIRSF AA_transporter 50 505 - -
Vifa1g09176 591 PIRSF AA_transporter 479 585 - -
Vifa1g09176 591 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 62 565 - -
Vifa1g09176 591 FunFam Cationic amino acid transporter 5 70 505 - -
Vifa1g09176 591 Pfam C-terminus of AA_permease 515 564 IPR029485 -
Vifa1g09176 591 Gene3D Amino acid/polyamine transporter I 70 498 - -
Vifa1g09176 591 Pfam Amino acid permease 76 469 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09176 Vifa-Chr1 1451622586 1451624361 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09176 1 1451622586 1451624361 Vifa1g09176 1 1451622586 1451624361 ECH