Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09174 ATGACTTACACTTTCACTTTCTTCCATTCTTGCATCTTCTTGTTCTATCTTCTCCTTTCAACTCCTTCACGTGCTTCTTCGTTTTCTGGAATAGAAACTGGAGATTTAGAAAAAAGGGGTGATTTGTTTCCGCAGATTCTAAGAGACGAGGCGGTGGCGAGACTTGTTGAGCTTGGAAAGGTCAGTGATGCTAGTGGCTATCTAGAGAGGACATTTTTGAGTCCTGCCTCGATGAGGGCGATTGATCTTATTCAAACATGGATGGAAGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTGCACGGTAGAGTCGAGGGTGCAAATGAAAATACAGAAGCTTTATTGATTGGATCTCACATGGACACTGTTGTTGATGCTGGTAAATTTGATGGATCACTAGGAATAGTCTCTGCAATATCTGCATTAAAGGTTATGCATGTCAATGGAAAGCTGCAAAGTCTAAGGCGTCCTGTTGAGGTGATTGCATTTTGCGATGAAGAGGGTGTGAGATTTCAAACTACTTTCTTAGGTAGTGGAGCTATAGCTGGTATTTTACCTGCTACGACATTGGAGATAACTGATAAGAGGAATGTAACGATAAAAGAGGTTCTTAAAGGGAACTCAATAGAAGCCGCGGAGGAAATGTTTTTGCAGCTCAAGTATGATCCAAAATCTGTTTGGGGTTATGTCGAGCTTCACATTGAGCAAGGTCCTGTGCTGGAACAAGTTGGTTTCCCACTTGGTGTCGTTAAAGGCATAGCTGGACAGACACGATTGAAAGTTATGGTTAAAGGCTCACAAGGTCATGCAGGAACTGTTCCAATGTCCATGCGCCAGGATCCTATGGTGGCTGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGCAAACATCCCGAAGAATACCTTTCTTTTGATGGTCATTGCAGTGATTCATCGATAAAATCACTTTCAAGTTCGCTTGTTTGTACAGTTGGTGAAATATCAACATGGCCAAGTGCTAGTAATGTCATTCCAGGCCAGGTTACATATACAGTCGATATACGAGCAATTGATGATCTTGGACGTGAGGCTGTTATCTACGATTTATCCCATCGAATTTACCAGATATGTGACAAGCGTTCAGTTTCCTGCCTTATTGAACACAAGCATGATGCAGGTGCTGTGATTTGTGATCCTGATCTAACCTCACAGCTAAAGTCTGCAGCTTATTCTGCACTCAAGAGAATGGAAGGTGACATTCAAGATGAAGTGCCAACATTAATGAGTGGAGCAGGGCACGATGCCATGGCAATGTCTCGCTTAACAAAGGTGGGAATGCTATTTGTGCGCTGTCGCGGAGGCATAAGTCACTCTCCACAAGAAGATGTACTAGACGATGATGTTTGGGCGGCCGGTTTAGCAACCTTATCATTTCTGGAAAATCTATGA 1440 0.4306 MTYTFTFFHSCIFLFYLLLSTPSRASSFSGIETGDLEKRGDLFPQILRDEAVARLVELGKVSDASGYLERTFLSPASMRAIDLIQTWMEDAGLRTWVDQMGNVHGRVEGANENTEALLIGSHMDTVVDAGKFDGSLGIVSAISALKVMHVNGKLQSLRRPVEVIAFCDEEGVRFQTTFLGSGAIAGILPATTLEITDKRNVTIKEVLKGNSIEAAEEMFLQLKYDPKSVWGYVELHIEQGPVLEQVGFPLGVVKGIAGQTRLKVMVKGSQGHAGTVPMSMRQDPMVAAAEQIVLMESLCKHPEEYLSFDGHCSDSSIKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSHRIYQICDKRSVSCLIEHKHDAGAVICDPDLTSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMAMSRLTKVGMLFVRCRGGISHSPQEDVLDDDVWAAGLATLSFLENL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09174 479 Gene3D - 258 390 - -
Vifa1g09174 479 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 117 126 IPR001261 -
Vifa1g09174 479 CDD M20_bAS 52 477 - -
Vifa1g09174 479 NCBIfam hydantoinase/carbamoylase family amidase 52 472 IPR010158 GO:0016813
Vifa1g09174 479 SUPERFAMILY Bacterial exopeptidase dimerisation domain 258 390 IPR036264 -
Vifa1g09174 479 Gene3D Zn peptidases 62 469 - -
Vifa1g09174 479 PANTHER ALLANTOATE DEIMINASE-RELATED 21 477 IPR010158 GO:0016813
Vifa1g09174 479 FunFam Allantoate deiminase 258 390 - -
Vifa1g09174 479 Pfam Peptidase family M20/M25/M40 118 468 IPR002933 GO:0016787
Vifa1g09174 479 SUPERFAMILY Zn-dependent exopeptidases 43 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09174 Vifa-Chr1 1451436567 1451439878 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09174 1 1451436567 1451439878 Vifa1g09174 1 1451436567 1451439878 ECH