LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g09108	ATGGCTTCGGAGTTGGAAATTGATCAAGGGAATGATAACAAAGGTAATATGTGGGATATGGAGCAGAAACTTGATCAATCAATGGACGAGGAAGCAGGAAAGCTCAGAAATATGTATAGAGAAAAAAAGTTTTCTGCACTGTTGGTTATAAGGCTTGCATATCAGAGTCTCGGTGTAGTTTATGGAGATTTGGGAACTTCTCCGTTATACGTTTTCTATAACACGTTCCCTCACGGAGTTGATGATCCAGAGGACGTGATCGGAGCTCTTTCGTTGATCATTTACTCGCTTACTCTTGTGCCGTTGCTCAAATATGTTTTTATTGTGTTACGAGCAAATGACAATGGTCAAGGTGGAACACTGGCTCTTTATTCCTTGCTCTGCCGACATGCGAATATTAAAATCATTCCCAACCAGCATCGCACGGATGAAGAATTGACAACATATAGTCGGACTACAATCCATGAAAGGTCGTTTGCTGCGAAAACTCAAAGATGGTTAGAGGGGCATTTTACTAAAAGTGCCATTCTTATTCTTGTCCTTGTTGGTACCTGTATGGTGATTGGAGATGGTATTCTTACTCCGGCTATATCTGTTTTATCTGCGGCTGGTGGCATCAGGGTAAACAAACCTGAAATCCATAGTGGAGTAGTTGTGATTGTTGCTGTTGTAATATTAGTTGGGCTATTCAGCGTGCAACATTATGGTACAGATAAAGTTGGTTGGCTCTTTGCCCCAATTGTTCTGGTTTGGTTTATCCTAATTGGAGGCATAGGTATATACAACATTTGGAGATTTGGTGGCAGAGTTCTAAAAGCCTTTTCGCCTCTCTATGTTTATCGGTATATAAGAAACGGAAGAAAAGAAAGTTGGCTTTCCCTTGGCGGCATCTTGCTCAGCATAACCGGGACAGAAGCTCTTTTTGCCGACTTAGCCAACTTTCCAGTCTCATCGGTACAAATTGCATTTACTCTTCTTGTGTTTCCTTGCCTTCTTTTAGCTTATTCTGGACAGGCGGCTTATCTTGTGCATAACTTGCATCATTCACAAGATGTTTTTTATCGCTCTATTCCAGACAAAATATACTGGCCAGTATTTGTTGTTGCAACACTAGCAGCAATAGTTGCAAGCCAGGCCACAATAACAGCAACCTTTTCAATCATTAAGCAAGCTCTTGCTCATGGCTGTTTCCCAAGAGTCAAAGTTGTTCATACATCAAAAAAGTTCCTTGGCCAGATATATATCCCGGATATCAATTGGATCCTTATGATTCTCTGCATTGCCGTTACTGCCGGCTTTAAAAATCAAAGTCAGATTGGTAACGCATATGGCACCGCAGTTGTGTTAGTCATGTTGGTTACAACACTGCTCATGATTTTGGTCATGATATTAGTTTGGCACTGCCATTGGATTCTTGTGATTGTGTTTACTGCCTTATCATTGATTGTGGAATGCACATACTTTTCTGCTGTACTCTTCAAAGTCGATCAAGGTGGGTGGGCGCCACTTGCAATTGCCGGAGTATTTCTGCTTGTTATGTATGTTTGGCATTATGGTACACTGAAGCGTTACGAATTTGAATTGCATAGTAAAGTCTCAATGGCATGGATTCTCGGACTCGGTCCCAGTTTAGGACTAGTTCGTGTCCCCGGAATCGGCCTAGTCTACACAGAACTCGCAAGTGGAGTTCCTCACATATTTTCTCATTTTATTACCAACCTACCAGCCATTCATTCTGTAGTTGTTTTCGTCTGTGTGAAATATCTTCCGGTCTACACCGTCCCGGAAGAAGAACGTTTCCTTGTCAAGCGTATCGGACCAAAGAACTACCACATTTTTCGATGTGTGGCGCGATATGGATATAAAGACCTGCATAAGAAAGACGATGATTTTGAGAAGAAACTCTTTCACAACCTTTTCATGTTTGTTCGACTTGAATCCATGATGGAAGGTTGCTCAGATTCGGAATACAGTTTATGTGAACCGCAAACCGAACAGTCGAGAGATTTCACGTTGAATAACAACGGAAACACAAATTCATTGAGTAACGGGGATTTAACAATTTCATCTGTTGACTCAATAGTTCCTGCAAGATCACCGGCACATGTAAATGTTACTTTTCAGTCCTCTAGTCATTTCTCTGAGGTCGACGAATATGAATTTTTAAGCAACTGTAGAGAAGCTGGTGTTGTTCACATACTAGGAAACACAGTCGTGGTTGCTACTAGGGATTCAAGATTTTACAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGAAAGATATGCAGGGAAAATAGTGTGATCTTCAATATTCCTCATGAAAGTCTCTTAAACGTTGGTCAAGTTTTCTATGTATAG	2364	0.4074	MASELEIDQGNDNKGNMWDMEQKLDQSMDEEAGKLRNMYREKKFSALLVIRLAYQSLGVVYGDLGTSPLYVFYNTFPHGVDDPEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTLALYSLLCRHANIKIIPNQHRTDEELTTYSRTTIHERSFAAKTQRWLEGHFTKSAILILVLVGTCMVIGDGILTPAISVLSAAGGIRVNKPEIHSGVVVIVAVVILVGLFSVQHYGTDKVGWLFAPIVLVWFILIGGIGIYNIWRFGGRVLKAFSPLYVYRYIRNGRKESWLSLGGILLSITGTEALFADLANFPVSSVQIAFTLLVFPCLLLAYSGQAAYLVHNLHHSQDVFYRSIPDKIYWPVFVVATLAAIVASQATITATFSIIKQALAHGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILVMILVWHCHWILVIVFTALSLIVECTYFSAVLFKVDQGGWAPLAIAGVFLLVMYVWHYGTLKRYEFELHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYKDLHKKDDDFEKKLFHNLFMFVRLESMMEGCSDSEYSLCEPQTEQSRDFTLNNNGNTNSLSNGDLTISSVDSIVPARSPAHVNVTFQSSSHFSEVDEYEFLSNCREAGVVHILGNTVVVATRDSRFYKKIAVDYIYAFLRKICRENSVIFNIPHESLLNVGQVFYV	787

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g09108	787	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	38	785	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Vifa1g09108	787	Pfam	K+ potassium transporter	54	623	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Vifa1g09108	787	NCBIfam	potassium uptake protein	52	787	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g09108	Vifa-Chr1	1442763651	1442766794	Proximal

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa1g09108	1	1442763651	1442766794	Vifa1g09108	1	1442763651	1442766794	ECH