Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08983 ATGGCTTTTATTTCTGAGGTCAACATGAGTTACTCTTCTTCTCATTACATGGATGATGAATATGAGAAACTATTCAGGAGAATGAATCCTCCTAGGGTTGTAATTGATAATGAAGCCTGCAAGAATGCCACTGTTATAAGGGTTGATAGTGCAAACAAACATGGGATACTTCTTGAAGTTGTGCAAATCCTCACTGATTTAAGTCTCATTATAACTAAGGCTTATATATCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTAACTGGCCAAGATGGAAACAAAGTCACTGATGAAGTCATTTTGGATTACATTAGAAAGTCTCTTGGTCCTGAATCCTGCTTTCCGACTACAATGAGATCTGTCGGCGTGAAACAAACAATGGACCACACAGCTATAGAGTTAATGGGAAGTGATAGGCCAGGGTTGCTCTCAGAAGTGAGTGCTGTTCTCACAAACCTCAAATGCAACATAGTGAATGCTGAGGTTTGGACTCACAATACTCGTGCGGCTGCTGTAATGCATGTGACCGATGAGGAAACCGGTTCTGCTATCACCGACTCTCAGAGGCTTTCGTTAGTCAAGGAGCTTCTATGCAATGTGCTTGGTGGTGGAAATAGGAAAAGAGGTGCCAAAACTGTTGTCACGGATGATTCGACGCATACTGATAGAAGACTTCATCAGATGATGTTTGATGATAGGGATTATGAACGTGTCGACGATGATGAATTCGACGAGAAACAGAGACCAAATGTCGATGTTGTTAATTGGTCTGATAAGGATTATTCTGTTGTAACTATTGAATGTAAGGATCGGCCTAAGCTTTTGTTCGACACGGTTTGTACTTTGACAGATATGCAGTATGTGGTGTTTCATGCCAATATTGATGCTGAGGGGCCACAAGCATATCAGGAATATTACATCAAGCATATAGATGGGTCCCCTGTAAAATCTGATGCAGAAAGACAAAGAGTGATACACTGTCTTGAAGCTGCAATTGAGAGAAGAGTTTCCGAGGGTTTGAAGCTAGAAATCTGCACCACCGACAGAGTAGGACTATTATCAAACGTGACACGTATCTTTAGAGAGAATAGCCTCACAGTTACAAGAGCTGAAGTAACAACAAAAGGAGGGAAAGCTGTGAACACATTCTATGTTCGTGGAGCTTCTGGTTGTATTGTTGATTCTAAGACAATTGAATTCATTAGGCAAACAATTGGTAACACAATACTAAAAGTAAAGGGTAGTCCTGAATCTGTTCCTCAAGATTCTCCTACAAGATCTTCTATCTTTAGTGGTCTTTTCAAGTCAAGATCTTTTGTTAACTTTGGTTTGGTTAAATCTTACTCTTGA 1356 0.4012 MAFISEVNMSYSSSHYMDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLSLIITKAYISSDGGWFMDVFNVTGQDGNKVTDEVILDYIRKSLGPESCFPTTMRSVGVKQTMDHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEETGSAITDSQRLSLVKELLCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERVDDDEFDEKQRPNVDVVNWSDKDYSVVTIECKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDGSPVKSDAERQRVIHCLEAAIERRVSEGLKLEICTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGGKAVNTFYVRGASGCIVDSKTIEFIRQTIGNTILKVKGSPESVPQDSPTRSSIFSGLFKSRSFVNFGLVKSYS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08983 451 SUPERFAMILY ACT-like 339 407 IPR045865 -
Vifa1g08983 451 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 15 416 IPR040217 -
Vifa1g08983 451 ProSiteProfiles ACT domain profile. 343 419 IPR002912 -
Vifa1g08983 451 CDD ACT_ACR_2 132 205 - -
Vifa1g08983 451 ProSiteProfiles ACT domain profile. 45 122 IPR002912 -
Vifa1g08983 451 Pfam ACT domain 134 186 IPR002912 -
Vifa1g08983 451 CDD ACT_ACR_3 263 337 - -
Vifa1g08983 451 SUPERFAMILY ACT-like 40 108 IPR045865 -
Vifa1g08983 451 ProSiteProfiles ACT domain profile. 133 220 IPR002912 -
Vifa1g08983 451 SUPERFAMILY ACT-like 128 185 IPR045865 -
Vifa1g08983 451 Gene3D - 128 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08983 Vifa-Chr1 1424706409 1424709176 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08983 1 1424706409 1424709176 Vifa1g08983 1 1424706409 1424709176 ECH