LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g08973	ATGCTGGGAAAAAGTGTCTCGAAAGAGCACTTTCAGCCCCGAACATGTTCGGGGAAGAAACGGTTGAAAACTGGTCAGGAAAAAGGGAGTCTAGATGATGTTGTTTTCATTGACTTAGATAGTGATCAGTTTGATGATGTAGAAATCATAGATTGTCCTGACGTTGTTAAAGAAAAGTTCCGTGGGTCAAGTGGGCCGAGTAGAGATAGGATATCGACACCTCAAAGTGTTATTAGCATTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGACGACGACGACGACGATGAGGATGATGAAAGTGATCCTGAAATTGTTGTTGATGGTGTTGGAGAGTTGGATAGTGACGCGTCTTCGAATAAATGGTTTTATACGGCTTCGAGTTCCATGCAACATTCTGTAGTTGTAGATGTTGATGATTGTGATGTCGTTGAAAAAGATTCTGTTTCAAAGAGGCAGAAAAGTAATCAAGCTTCTGTGTGTAACGGGAAAAAGCGCAAGGAAGTATTCACTCCAAAGGCTACTGAAAGAAATCTGTATGGTTTATATGAGTTTGAAAGTGATAGTGATTGTTCTGATTGTGAGGTCATTAAACGTGAACAGTGGGAAAAGGTTTCGGCAGAGAGAAAGTGCCGTGTATTTAATGAGCAAGCCAGTTCTTCTGGCTTACAGAAAAATAATTATAATAATATAGATATAGAAGTGGGAAATAGGTCTAAAAAGCATGGGAAAGACCCTTTATATGGTCCTGGCAGTGGTAAAAATGTTAAAGAGAATCAATCTTCCTTTACTTGTAAGGATGATATTCGGCATGGAGAAAAAACAACCAGGGAAAAAGTTTATCCCTGCCCCAAGTCAAAAAACTGCAATTTCTGTAATGGTGTTACTGGTTCTTCAGGGTTAGACAATGAACGGGGAGATGAAGAGTCTGAATTTAAGGATGCTACTCGACCTGGAGAAAGGTCAACTATAGAAAAAGTTTCTGCCTGCCCCAACTCTCAAAACTCGAATATCTCTAATGGTGTTACTGGTTCTTCAAGATTTGAGAAAGAACTAGGTGATAAAGAGAAGTTTATGAGCTCCAACCAAGATGCACATGACATGCAAGTTGACGATGAGGAATCTCCATTGAATGCACATGACAGGCATTTTAATGGTTCTGAGTTTGAGTTACGTGCTCAAGATGCTGATCCTACCGCTTCAAATGAGAAGAATATAATTAATCAAAAAGAAAAGCTTAAGGAGACTGATTTATATAAACAAGCCATGGAAGAGGAATGGGCATCAAGACAGCGACAATTGCAAATTCAGTCAGAGGAAGCACAAAAGTTGCGCAAAAGAAAAAAGGCTGAAAGTCGCCGATTGCAAGATATTGAGAGAAGGCAAAAAGAACGCGTTGAAGAAGTGAGAGAGACAGATAAGAAGGAGGAAGAATATATGAACATGAAAGAGCAACTGCGGGGTGAAGTACTGAAGAAGCTCAATCAATTGGAGAATCAATGCTCAGATATGACCTCACTGCTTCGTGGCTTAGGAATAAATGTGGGGACAAGTCTTAGACCTTTACCCAATGAGGTGCATGCTGCCTATAAACGGGCTATGTTTAAGTTCCATCCAGACCGAGCATCAAAAACTGACCTTCGCGAGCACGTTGAGGCTGAGGAGAAGTGCAAGCTCATCTCACGCATGAAGGAGAAGTTTTGTAATACTTCATGGCACTAG	1749	0.4037	MLGKSVSKEHFQPRTCSGKKRLKTGQEKGSLDDVVFIDLDSDQFDDVEIIDCPDVVKEKFRGSSGPSRDRISTPQSVISIDDDDDDDDDDDDDDDDDDDDDDDDDEDDESDPEIVVDGVGELDSDASSNKWFYTASSSMQHSVVVDVDDCDVVEKDSVSKRQKSNQASVCNGKKRKEVFTPKATERNLYGLYEFESDSDCSDCEVIKREQWEKVSAERKCRVFNEQASSSGLQKNNYNNIDIEVGNRSKKHGKDPLYGPGSGKNVKENQSSFTCKDDIRHGEKTTREKVYPCPKSKNCNFCNGVTGSSGLDNERGDEESEFKDATRPGERSTIEKVSACPNSQNSNISNGVTGSSRFEKELGDKEKFMSSNQDAHDMQVDDEESPLNAHDRHFNGSEFELRAQDADPTASNEKNIINQKEKLKETDLYKQAMEEEWASRQRQLQIQSEEAQKLRKRKKAESRRLQDIERRQKERVEEVRETDKKEEEYMNMKEQLRGEVLKKLNQLENQCSDMTSLLRGLGINVGTSLRPLPNEVHAAYKRAMFKFHPDRASKTDLREHVEAEEKCKLISRMKEKFCNTSWH	582

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g08973	582	MobiDBLite	consensus disorder prediction	311	330	-	-
	Vifa1g08973	582	MobiDBLite	consensus disorder prediction	79	118	-	-
	Vifa1g08973	582	Gene3D	DnaJ domain	444	580	IPR036869	-
	Vifa1g08973	582	MobiDBLite	consensus disorder prediction	244	270	-	-
	Vifa1g08973	582	MobiDBLite	consensus disorder prediction	1	26	-	-
	Vifa1g08973	582	MobiDBLite	consensus disorder prediction	306	355	-	-
	Vifa1g08973	582	MobiDBLite	consensus disorder prediction	335	355	-	-
	Vifa1g08973	582	Coils	Coil	478	509	-	-
	Vifa1g08973	582	PANTHER	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN	1	579	-	-
	Vifa1g08973	582	MobiDBLite	consensus disorder prediction	58	127	-	-
	Vifa1g08973	582	SUPERFAMILY	Chaperone J-domain	470	578	IPR036869	-
	Vifa1g08973	582	MobiDBLite	consensus disorder prediction	367	396	-	-
	Vifa1g08973	582	Coils	Coil	440	470	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g08973	Vifa-Chr1	1422528822	1422534837	Tandem

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa1g08973	1	1422528822	1422534837	Vifa1g08973	1	1422528822	1422534837	ECH