Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08383 ATGTCAGAAATCGTTCTTGCAGAACCAATTCATTTCGAGCAAGGCGAATCATCAACAGCGAGACAAAATCACCACGAATACGATGAAAGGTTACCAACTGTTTTCGCTTCTGAAATCCAAAGGTTCCTTCGTGTTGCTAATTTGATCGAAAAGGATGAGCCTCGTGTCGCGTATCTTTGCCGGGTTCAGGCGTTTGTAATTGCGCACAACTTGGACAAGAATTCAAGTGGAAGAGGTGTTAGACAATTCAAAACTTCACTTCTTCATAGACTTGAACAGGATGAGAATGCAACAAAAAGAGGTGGAATAGGTGATATTCGCGAACTAAAGCGTGTTTACCACGTCTATAGGGATTATTTTACTAGAAATAACAAAGCATTTGATCTAGAACAAAGTTATAGAGAAAAATTGATAAATGCAAGAATTATTGCTTCTGTTCTGTTTGAGGTTTTAAAAACGGTTACAATCACACCTAGTAATCAGGCACTTACGGAAGGAAATGCAATCCACAAAAAAACCGAGTTTAACATTCTTCCACTTGAACAAGGGGGAATCCAACATGCAATCATGCAGCAGCCTGAGATTAAGGCTGCCATTGCAGTAATTCGCAACGTTCGAGGTTTACCACCGGCCCAAGATTTCAAGAAACACGGAGCCTTTGTAGATTTGTTTGATTTTCTTCAGCATTGTTTTGGGTTCCAGGAAGCCAATGTGGCAAACCAAAGGGAACATTTGATTCTACTTCTAGCAAACATGCAGACTAGGCAAACTCACAACCAGACATCTGCCTTGAAGTTAGGAGAGAGTGGCGTGGATGAATTGATGAGAAAGTTCTTCAAAAATTATACTACCTGGTGCAAGTTTTTAGAAAGAAAAAGCAATATCCGCTTACCTTACGTAAAACAGGAAGCACAACAATATAAAATTTTGTACATTGGTCTTTACCTGCTCATATGGGGGGAGGCAGCTAATTTGAGGTTCATGCCAGAATGTCTTTGCTATATCTTTCACCATATGTCATATGAACTGCATGGAGTTTTAAGTGGTGATATCAGCTTTACAACATGGGAAAAGGTCATGCCAGCATACAGAGGAGAACCAGAATCTTTCCTTAATAATGTTGTCACACCTATATACAAAGTTATAGAAAAGGAAGTTCACAATAGCAAAGGTGGAACAACTGACCATTCTGCATGGAGAAACTATGATGATCTGAATGAATACTTCTGGTCTCCTGATTGTTTTGGAATTGGTTGGCCAATGCGTGAAGAGGACCATGATTTTTTCTTTGTAAAAACCAAAGATAAACCCCATTTCAAGAATGCTCATGTTGTATCACCTGCTCAAAAGAAAGAAAAGAAGAAGAGTAAGAAGGAAGAAAAGAAGGTTGAAGAAGATGCACAGGAAACTGTCGATGAAAATCAGGAAAAGAGAGAGCGGCATTGGCTAGGAAAAACAAATTTTGTAGAGATTCGTTCATTTTGGCAAATTTATAGAAGCTTTGATAGAATGTGGAATTTTTATATTCTATCCCTTCAGGCCATAATAATCATTGCTTGCCATGACTTGGGATCTCCACTTCAGTTGTTTGATGCCACAGTATTTGAGGACATCATCAGCATCTTTATTACTTCAGCAATTCTTAAACTTATTCAAGCAATATCAGACATTGCCTTTACATGGAAAACCAGATACACCATGGAACATTCACAAAAGGTGAAACATGTGGTGAAGCTGGCATTTGCTATTATATGGAACATCATTCTTCCCGTGTGCTATGCTAATTCAAGAAGAAAATATACTTGTTATTCCACCAAGTATGGAAGTTTGGTTGAGGAATGGTGCTTTACTTCCTATATGGTTGCTTCTGCAATATACTTGACTAGTAATGCAGCTGAAGTTGTGTTATTTTTTGTGCCTGCTATGGGAAAATATATTGAGGTCTCCAATAACAAGATATGCAAAGTTTTGGCTTGGTGGATTCAGCCAAGAATCTATGTTGGACGCGGGATGCAAGAAGACCAGGTTTCTGTTCTTAAGTACACGGTGTTCTGGATATCGGTGTTATCATGTAAATTTTTGTTCAGCTACAGTTTTGAGATAAAACCACTCATAGAACCAACTAGACAGATCATGAAAATCGGTGTAAGGAAGTATGAATGGCATGAACTTTTTCCAAGAGTAAAAAATAATGCTGGTGCAATTGTAGCTGTATGGAGCCCTGTAGTAATGATATATTTTATGGACACGCAAATTTGGTATTCTGTTTTCTGTACAATAGTTGGTGGAGTTTATGGAGTTTTGCATCACCTTGGTGAGATAAGGACACAAGGAATGCTTAGAAGTAGATTTGACAACTTACCAGCAGCATTCGATGTTTGTCTGAACCCACCATCTTCCAAACGCGGTAAAAAGAGAAGAAAAGGTTTCCTCAGCAATATATTTCAAAAGCTTCCTGATGAAAAAAATGCTATTGCCAAATTTGTGGTAATATGGAATCAGATTATAAGTCATCTTCGTCTCGAAGACTTGATTAGTAACAGAGAGATGGATTTAATGGTGATGCCTGTGTCTTCAGAATTGTTTTCTCGCAAGGTTCTTTGGCCTATTTTTCTCTTGGCAAACAAGTTTTCTACTGCATTGACTATTGCAAAGGATTTTGAGGGAAAGGAAGAAATTCTTGCCAAAAGAATTACAAAAGACAAATACATGTTTTATGCTGTAAGAGAATGCTACCAGTCACTGAAATATGTTCTTGAGATTCTTATTGTCGGTAACCAGGAGAAAAGGATTATACACGATATATTAAGCGAAATTGAAAAAAGTATTGAAGAAACAACACTTCTTAAGAACTTCAAAATGAAAGTTCTTCCAGCTCTACATGAGAAGGTCATTGAGTTAGCTGAACTTCTGATTGAGGGAGATAAAGACAATCGGCACAAGGTATCGAAGGCTTTACTCGATATGTTTGAACTGGTAACAAATGAAATGATGGATGATTCAAGAACATTGGATACATCTCACTTTCCCGAACAAAATGAGTGTGGCTTTGTCTATTTTAGAGACGATGATCAATTATTTTCCAGTGAGGAAATTAATAGTGAATCCTTTCCATTTTCCAATGAAAGTTGTATCCATTTTCCCTTGCCAGAAGGTCCTCTGATGGAAAAGATCAAGCGATTTCATTTTTTAATTACTGTCAAAGAGACAGCAATGGACATTCCTGCAAACTTAGATGCTCGTAGACGCATATCATTCTTTGCTACTTCTCTGTTTACAGATATGCCGGATGCTCCAAAAGTGCATAGTATGATGTCATTTAGTGTTATAACCCCACACTACATGGAGGACATCAGTTTTTCTATGAAGGAGCTTGGTTCAGAAAAAGAAGATGACTCCATCATCTTTTACATGCAAAAGATATATCCAGATGAATGGAAAAACTTTTTGGAGCGAATGTGTTGTGAAAACCGGAAGAGTTTAGAAGATGAAAACAAATTAGAAGAGCTTAGATTGTGGGCGTCGTTCAGGGGACAGACACTAGGCAGAACAGTTAGAGGGATGATGTACTACAGGGAAGCCTTAAAATTGCAAGCATTTCTTGACATGGCGGAAGATGAAGATATACTTGAAGGTTATGAGACAGCTGAAAAGGGTAACCGTGCGTTATTTGCCCGTCTAGAAGCATTAGCAGACATGAAATACACCTATGTCATTTCCTGTCAATCCTTTGCATTACAAAAGACTATGAATGATCCCCGTTATAAAGATACAATCGACTTAATGATAAGATATCCGTCTCTTCGTGTCTCTTATGTTGAGGAAAAGGAGGAGATTGTGCAGGGTAAACCTCACAAAGTATATTATTCTAAACTGGTTAAAGTTGTCAATGGTTTTGAGCAGACAATATATCAAATAAAACTTCCAGGCCCACCACAGCTTGGAGAAGGGAAGCCTGAAAATCAAAACAATGCAATAATATTCACTCGCGGCGAAGCTCTCCAAACAATTGATATGAACCAAGATAATTACTTGGAAGAAGCTTTAAAAATGAGAAACCTTCTCCAAGAATTTCTTAAGCGCCAGGGACGGAGGCCTCCTACAATACTTGGTTTAAGGGAACATATTTTCACAGGAAGTGTGTCTTCTCTGGCATGGTTCATGTCATATCAGGAAACCAGCTTTGTCACTATTGGTCAAAGGCTTCTGGCTAATCCTCTCAGGGTGCGGTTTCACTACGGCCATCCAGATGTATTTGACAGAGTTTTTCATATTACAAGAGGAGGAATAAGCAAAGCATCTAAAACAATTAATTTGAGTGAAGATGTTTTTGCTGGATTTAATTGTACTCTTAGAAGGGGATGTGTTTCCTACCATGAATATTTGCAAATTGGCAAAGGCCGCGATGTAAGTCTAAACTCGATCTCAAAATTTGAAGCCAAGGTTGCAAATGGAAACAGTGAGCAAACTATAAGCCGTGACGTTTTTCGCCTAGGACGACAGTTTGATTTTTTCCGCATGTTATCTTGTTACTTCACTACAATTGGATTTTACTTCAGCAGCTTGATATCAGTACTAGGAATATATGTATTTCTCTATGGACAGTTATACCTGGTGCTTAGTGGCTTAGAAAGAGCACTTGTCATTGAAGCGAGAATCAGGAATGTACAGTCCTTAGAAACAGCTCTTGCATCTCAATCATTTATACAACTTGGACTTCTAACCGGCTTACCGATGATGATGGAAATAGGTCTCGAGAGAGGTTTCCTCACAGCCCTTAAAGATTTTGTCCTCATGCAGTTGCAGCTAGCTGCCGTTTTCTTCACATTCTCCCTTGGATCAAAAACACATTACTATGGCAGAACAATTTTACACGGAGGCGCAAAGTACAGACCGACCGGACGCAAAGTTGTTTTCCATGCCAGCTTCACCGAAAACTATAGATTGTATTCTAGAAGCCACTTTGTTAAAGCGTTTGAGCTAATGCTGCTTTTGATTGTATATAACATGTTCAGGAAATCTTATCAGAGTAGCATGACATATGTGTTGATAACTTACGCGATTTGGTTCATGTCTTTGACTTGGTTGTGTGCGCCTTTTCTATTCAACCCTGCTGGATTCAGCTGGACAAAGGCAGTAGATGATTGGAAAGAGTGGAATAAATGGATCAGGCAACAGGGTGGATTGGGAATCCATCAGGATAAAAGTTGGCATTCTTGGTGGTATGACGAACAAGCTCATCTTCGTCGAGCAACTCTTGGTTCCAGGTTTGCCGAGATATTGCTTTCGCTCCGTTTCTTCATCTATCAGTATGGTTTGGTCTATCATCTTGACATCACTCAGCAAAGCAAAAACTTGCTGGTTTATGTCTTTTCATGGATTGTGATTTTCGGAATTTTCATCTTGGTGAAGGCTGTCAACATAGGTAGGAACCAACTTAGTGCTAATCATCAACTTGGATTCAGATTTTTCAAAGCAATCCTGTTTGTGGCGGTTATTGCCGTCACCATTACTCTTTCAATCATATGTCAACTGTCAGTGTCAGACCTTTTTGTTTGCTGTATGGCATTCATGCCAACTGCATGGGGACTAATACAGATTGCACAAGCTGTAAGGCCAAAAATCGAGCATACAGGATTATGGGACTTCACACGTGCACTAGCTAGAGAATTTGATTATGGAATGGGGATAGTACTTTTTGGACCTATAGCTATTTTGGCGTGGCTACCAATTATTAAAGCCTTCCATGCACGAATCCTTTTCAATGAGGCATTCAAAAGACACTTACAAATTCAACCGCTTCTCTCAGCAAAGAAGAAGAAGCATAGACCTTGA 5835 0.3885 MSEIVLAEPIHFEQGESSTARQNHHEYDERLPTVFASEIQRFLRVANLIEKDEPRVAYLCRVQAFVIAHNLDKNSSGRGVRQFKTSLLHRLEQDENATKRGGIGDIRELKRVYHVYRDYFTRNNKAFDLEQSYREKLINARIIASVLFEVLKTVTITPSNQALTEGNAIHKKTEFNILPLEQGGIQHAIMQQPEIKAAIAVIRNVRGLPPAQDFKKHGAFVDLFDFLQHCFGFQEANVANQREHLILLLANMQTRQTHNQTSALKLGESGVDELMRKFFKNYTTWCKFLERKSNIRLPYVKQEAQQYKILYIGLYLLIWGEAANLRFMPECLCYIFHHMSYELHGVLSGDISFTTWEKVMPAYRGEPESFLNNVVTPIYKVIEKEVHNSKGGTTDHSAWRNYDDLNEYFWSPDCFGIGWPMREEDHDFFFVKTKDKPHFKNAHVVSPAQKKEKKKSKKEEKKVEEDAQETVDENQEKRERHWLGKTNFVEIRSFWQIYRSFDRMWNFYILSLQAIIIIACHDLGSPLQLFDATVFEDIISIFITSAILKLIQAISDIAFTWKTRYTMEHSQKVKHVVKLAFAIIWNIILPVCYANSRRKYTCYSTKYGSLVEEWCFTSYMVASAIYLTSNAAEVVLFFVPAMGKYIEVSNNKICKVLAWWIQPRIYVGRGMQEDQVSVLKYTVFWISVLSCKFLFSYSFEIKPLIEPTRQIMKIGVRKYEWHELFPRVKNNAGAIVAVWSPVVMIYFMDTQIWYSVFCTIVGGVYGVLHHLGEIRTQGMLRSRFDNLPAAFDVCLNPPSSKRGKKRRKGFLSNIFQKLPDEKNAIAKFVVIWNQIISHLRLEDLISNREMDLMVMPVSSELFSRKVLWPIFLLANKFSTALTIAKDFEGKEEILAKRITKDKYMFYAVRECYQSLKYVLEILIVGNQEKRIIHDILSEIEKSIEETTLLKNFKMKVLPALHEKVIELAELLIEGDKDNRHKVSKALLDMFELVTNEMMDDSRTLDTSHFPEQNECGFVYFRDDDQLFSSEEINSESFPFSNESCIHFPLPEGPLMEKIKRFHFLITVKETAMDIPANLDARRRISFFATSLFTDMPDAPKVHSMMSFSVITPHYMEDISFSMKELGSEKEDDSIIFYMQKIYPDEWKNFLERMCCENRKSLEDENKLEELRLWASFRGQTLGRTVRGMMYYREALKLQAFLDMAEDEDILEGYETAEKGNRALFARLEALADMKYTYVISCQSFALQKTMNDPRYKDTIDLMIRYPSLRVSYVEEKEEIVQGKPHKVYYSKLVKVVNGFEQTIYQIKLPGPPQLGEGKPENQNNAIIFTRGEALQTIDMNQDNYLEEALKMRNLLQEFLKRQGRRPPTILGLREHIFTGSVSSLAWFMSYQETSFVTIGQRLLANPLRVRFHYGHPDVFDRVFHITRGGISKASKTINLSEDVFAGFNCTLRRGCVSYHEYLQIGKGRDVSLNSISKFEAKVANGNSEQTISRDVFRLGRQFDFFRMLSCYFTTIGFYFSSLISVLGIYVFLYGQLYLVLSGLERALVIEARIRNVQSLETALASQSFIQLGLLTGLPMMMEIGLERGFLTALKDFVLMQLQLAAVFFTFSLGSKTHYYGRTILHGGAKYRPTGRKVVFHASFTENYRLYSRSHFVKAFELMLLLIVYNMFRKSYQSSMTYVLITYAIWFMSLTWLCAPFLFNPAGFSWTKAVDDWKEWNKWIRQQGGLGIHQDKSWHSWWYDEQAHLRRATLGSRFAEILLSLRFFIYQYGLVYHLDITQQSKNLLVYVFSWIVIFGIFILVKAVNIGRNQLSANHQLGFRFFKAILFVAVIAVTITLSIICQLSVSDLFVCCMAFMPTAWGLIQIAQAVRPKIEHTGLWDFTRALAREFDYGMGIVLFGPIAILAWLPIIKAFHARILFNEAFKRHLQIQPLLSAKKKKHRP 1944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08383 1944 Coils Coil 448 480 - -
Vifa1g08383 1944 SMART FKS1_dom1_2 306 422 IPR026899 -
Vifa1g08383 1944 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 163 1936 - -
Vifa1g08383 1944 Pfam 1,3-beta-glucan synthase component 1164 1758 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vifa1g08383 1944 Pfam Vta1 like 38 161 IPR039431 -
Vifa1g08383 1944 MobiDBLite consensus disorder prediction 442 474 - -
Vifa1g08383 1944 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 308 419 IPR026899 -
Vifa1g08383 1944 Gene3D - 26 178 IPR023175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08383 Vifa-Chr1 1308970037 1308989970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08383 28 1940 Glycosyltransferase AT3G14570 66.598 0.0 2682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08383 1 1308970037 1308989970 Vifa1g08383 1 1308970037 1308989970 ECH