Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07129 ATGGAAGAAGTTAAGCCTGTGAATTTGATTACCGTTCTTAGCATTGATGGCGGAGGAGTCAGAGGAATCATTCCTGGTGTTATTCTTGCCTATCTTGAATCTCAACTTCAGGAGATAGATGGTGCTAATGCAAGACTTGCAGATTATTTTGATGTAATTGCTGGAACAAGTACTGGTGGTCTCATTACAGCCATGTTAACTGCTCCTAATCCAAACAACCGTCCTTTATTTGCTGCCAGAGAAATCGTTCCATTTTACCTTAAAAACTTGCCACTTATATTTCCACAGAATAGTGGAATATTTGCACCGCTGGTGAACATAGCGAAAACTTTAACAGGACCTAAGTACAACGGAGAGTATCTCCAGAAGACAATAAAAGAGATAACAGGAAATACACTTTTGAGCCAAACTGTCACAAACATTGTTATTCCATCTTTCGATGTTGAAAAACTTCAGCCTACCATTTTTTCTTCCTATCAGATTGATGCTGAGCCAGCTTTAGATGTAAAACTGTCTGATATTTGCATAGCTACATCAGCTGCTCCAACTTATTTGCCTGCTCACTATTTTGAGAAGAAAGATGAACAAGGAAGAGTGATTAAAGAATATAACCTCATTGACGGCGGCGTTTGTGCTAACAATCCGACTATGGTTGCAATAAGAGAAGTGACAAAGGATTTGATAAGGCAGCCAAAAGGGAGAAATGTGAATAATGTTGGTATAGGATATGATCGTTTTCTTGTGATATCAATAGGGACAGGATCAAACAAGAGTGAGAGAAAGTACAATGCTAAGATGGTAGCTAAATGGGGTGCTTTGACATGGTTATTCAACACTGGTGCAACTCCCGTTCTTGACTGTTTCAACGAAGCAAGCACTGATATGGTTGATTATCATAATTGCGTGCTTTTTACGGCCCTTCAATCTCAAGACAACTACCTTAGAATTCAAGATGATACATTAGAGGGAGAGTTAGCTTCTGTGGATATATCTACTAAAGATAATCTGAATAATCTGGTGAAAGCTGGTGAGAATTTATTGAAGAAAAAATTTACTAGAGTGAATCTAGATTCAGGTATATATGAAACAGTTCCTGATAAAGGTACCATTCAGGATGAACTCAAAAGGTTTGCAGGTTTACTGTCGAAGATAAGAAAAGAGAAAAAGTCTAAGCATCAAAATGGCAAGTGA 1191 0.3795 MEEVKPVNLITVLSIDGGGVRGIIPGVILAYLESQLQEIDGANARLADYFDVIAGTSTGGLITAMLTAPNPNNRPLFAAREIVPFYLKNLPLIFPQNSGIFAPLVNIAKTLTGPKYNGEYLQKTIKEITGNTLLSQTVTNIVIPSFDVEKLQPTIFSSYQIDAEPALDVKLSDICIATSAAPTYLPAHYFEKKDEQGRVIKEYNLIDGGVCANNPTMVAIREVTKDLIRQPKGRNVNNVGIGYDRFLVISIGTGSNKSERKYNAKMVAKWGALTWLFNTGATPVLDCFNEASTDMVDYHNCVLFTALQSQDNYLRIQDDTLEGELASVDISTKDNLNNLVKAGENLLKKKFTRVNLDSGIYETVPDKGTIQDELKRFAGLLSKIRKEKKSKHQNGK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07129 396 CDD Pat17_isozyme_like 9 359 - -
Vifa1g07129 396 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 13 220 IPR002641 GO:0006629
Vifa1g07129 396 PANTHER XYLOSE ISOMERASE 8 390 - -
Vifa1g07129 396 FunFam Patatin 2 393 - -
Vifa1g07129 396 Gene3D Cytosolic phospholipase A2 catalytic domain 3 394 - -
Vifa1g07129 396 Pfam Patatin-like phospholipase 13 220 IPR002641 GO:0006629
Vifa1g07129 396 SUPERFAMILY FabD/lysophospholipase-like 10 366 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07129 Vifa-Chr1 1100562262 1100563977 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07129 9 391 Miscellaneous Gene Families AT4G37060 53.494 4.21e-154 441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07129 1 1100562262 1100563977 Vifa1g07129 1 1100562262 1100563977 ECH