Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07126 ATGGAAGAAGTTAAGCCTGTGAATTTCATTACCGTTCTTAGCATTGATGGCGGAGGCGTCCGAGGAATCATTCCTGGTGTTATTCTTGCCTACCTTGAATCTCAACTTCAGGAGATAGATGGTGCTGATGCAAGACTTGCAGATTACTTTGATGTAATTGCTGGGACAAGTACTGGTGGTCTCATTACAGCCATGTTAGCAACTCCTAATCCAAACAACCGTCCTTTATTTGCTGCCAGAGAAATCGTTCCATTTTACCTTAAAAACTTGCCACTTATATTTCCACAGAATAGTGGAATATTTGCGCCCATCATGAACACAATAAGAGAGGTGACAGGGAATACACTTTTGAGCCAAACTCTCACAAACATTGTTATACCATCTTTTGATATTGAAAAACTTCAACCAACCATTTTTTCCTCATATCAGATTGATGCTGAGCCAGCTTTAGATGTAAGACTGTCAGATATCTGCATAGCTACCTCTGCTGCTCCAACTTTTTTACCAGCTCACTATTTTGAGATACAAAATGAACAAGGAAGAGTGATTAAAAAATACAATCTCATTGACGGAGGTGTTTGTGCCAACAATCCGACCATGGTTGCAATAAGAGAAGTGATAAAAGATATGATAAGGCAACCACAAGGGAGAAATGAGAGCAATGTTGGTATAGGCTATGATCGTTTTCTTGTGATTTCAATAGGGACAGGATCAAACAAAAGTGAGAGAAAGTATAGTGCTAAAATGGCAGCAAAATGGGGAGTTTTGACATGGCTATTCAACTCTGGTGCAACTCCAGTTATTGATTGTTTCAATGAAGCAAGCACTGATATGGTTGATTACCATAACTCTGTCCTTTTTACTGCTCTACAATCTCAAGACAACTATCTCAGAATTCAAGATGATACATTAGAAGGAGAATTAGCTTCGGTGGATATATCTACTAAAGATAATCTGAATAATCTGGTGAAAGCTGGTGAGAATTTATTGAAGAAAAAATTTACTAGGGTGAATCTAGATTCAGGCATATATGAAACAGTTCCAGATAAAGGAACCATTCAGAAAGAACTCGATAGGTTTGCTAATAAACTCTCCGATATAAGAAAAAAGAAAAATTCCGAGCATAAAAATGGCAAGTGA 1140 0.3772 MEEVKPVNFITVLSIDGGGVRGIIPGVILAYLESQLQEIDGADARLADYFDVIAGTSTGGLITAMLATPNPNNRPLFAAREIVPFYLKNLPLIFPQNSGIFAPIMNTIREVTGNTLLSQTLTNIVIPSFDIEKLQPTIFSSYQIDAEPALDVRLSDICIATSAAPTFLPAHYFEIQNEQGRVIKKYNLIDGGVCANNPTMVAIREVIKDMIRQPQGRNESNVGIGYDRFLVISIGTGSNKSERKYSAKMAAKWGVLTWLFNSGATPVIDCFNEASTDMVDYHNSVLFTALQSQDNYLRIQDDTLEGELASVDISTKDNLNNLVKAGENLLKKKFTRVNLDSGIYETVPDKGTIQKELDRFANKLSDIRKKKNSEHKNGK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07126 379 Pfam Patatin-like phospholipase 13 203 IPR002641 GO:0006629
Vifa1g07126 379 Gene3D Cytosolic phospholipase A2 catalytic domain 4 377 - -
Vifa1g07126 379 PANTHER XYLOSE ISOMERASE 8 372 - -
Vifa1g07126 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 13 203 IPR002641 GO:0006629
Vifa1g07126 379 FunFam Patatin 2 376 - -
Vifa1g07126 379 SUPERFAMILY FabD/lysophospholipase-like 11 355 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07126 Vifa-Chr1 1100188005 1100190408 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07126 9 369 Miscellaneous Gene Families AT4G37060 50.363 1.38e-140 405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07126 1 1100188005 1100190408 Vifa1g07126 1 1100188005 1100190408 ECH