Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07107 ATGGAAAAAGGAGAGAGCAAGAAAATGTCAGCACGCAATGCTTCGAGAAACGAGCGTCGGGAAAGGAAAATGGCTTTGATACAAGATGTTGATAAGTTAAAGAGGAAGCTAAGACATGAAGAGAATATTCATAGAGTGTTAGAAAGAGCACTTACAAGACCTTTGGGAGCCCTTCCTCGGCTTCCGCCTTATCTCCCTCCTCGTACATTAGAGCTTGTGGCTGAAGTTGCCGTATTGGAGGAAGAGGTGGTTCGATTAGAAGAGAAGATTGTGAATTTCAGACAAGGTTTATACCAGGAAGCTGTATACATTTCCTCCAAGAGGAATGCGGAAACTCCAATTGATCCAATGGAGCACAATTCCATCACAGGATCCAAACATCAAAGAAAGCTAGTCAATGGGAAGGAATTACATTCAAAACAAGATTCCTTATCATCGATCCCAGAAGACAAATCTCTTGCAAAGAAAACGGAAAAGGTTATCACTCCAGTGAAGAAATCACCAACCAAACAAGAATCATCCGACAAGAGTGTAGATCACTTGAAGTTGCAGCTGGAGAAGAGATTAGTAGATCAGGAGAGAGCACAAAACTCGTCAATTTCATCAGATGATAAGGTGTTAGAAGTTGATAGTACGCCAAATAGAGTTTCAGAGGATATTGTCAAGTGTTTATGTAGCATATTTATGAGAATTGGCACATTCAAGGACAATTTAGGAGAGTCAAAAACAAAAACACCTCCACGTGATCCATACGGCATCTGTACAGTATCCAAAACTAGAAATATTGGTGCCTACAATAGTTTTTACGAGATTAAAGCACCCACCGTTGATTTCAACCGAATGAGAAATGCAGTGTTTCTGACCAATAGATTAAAGTTCCTATTTGGGAAGCTTGCTTCTGTGAACTTGAAGGGTCTTACTCATCAGGAGAAACTTGCATTTTGGATAAACACTTATAATTCCTGTATGATGAATGCATATTTTGAGAATGGCATACCTGACAGTCCTGAAATGGTTGTAGCACTGATGCAGAAGGCAACAATAGTAGTGGGTGGCCACTTGCTCAAGGCAATTACAATAGAGCATTTCATATTGAGACTTCCTTATCATCTGAGTTTCACCTGTCTAAAAGCTGCGAAAAACGATGAGATGAAAGCAAGAAGCATATTTGGCTTGGAATGGACCGAGCCTTTGGTTTCATTTGCACTTTCCTGTGGAAGCTGGTCTTCACCTGTGGTAAGGGTGTACACAGCATCACAAGTTGATAATGAGTTAGAAGCAGCAAAGAGAGATTATTTACAAGCAGCAGTTGGCATTACAACAACAAACAAGTTAATAATTCCAAAGATACTTGACTGGTTTTTACTTGACTTTGCAAAGGACTTGGAATCTTTGTTGGATTGGGTCTGCCTTCAGCTACCTGTTGAGCTGAGAAAGGAAGCAGTTGAGTGCCTTGAAAGAAAAGGAAGACAGCCTCTTTCACAGCTGGTCCAAATGATGCCCTATGACTTCAGTTTCAGGTTGCTTGTACACCAATAA 1539 0.4055 MEKGESKKMSARNASRNERRERKMALIQDVDKLKRKLRHEENIHRVLERALTRPLGALPRLPPYLPPRTLELVAEVAVLEEEVVRLEEKIVNFRQGLYQEAVYISSKRNAETPIDPMEHNSITGSKHQRKLVNGKELHSKQDSLSSIPEDKSLAKKTEKVITPVKKSPTKQESSDKSVDHLKLQLEKRLVDQERAQNSSISSDDKVLEVDSTPNRVSEDIVKCLCSIFMRIGTFKDNLGESKTKTPPRDPYGICTVSKTRNIGAYNSFYEIKAPTVDFNRMRNAVFLTNRLKFLFGKLASVNLKGLTHQEKLAFWINTYNSCMMNAYFENGIPDSPEMVVALMQKATIVVGGHLLKAITIEHFILRLPYHLSFTCLKAAKNDEMKARSIFGLEWTEPLVSFALSCGSWSSPVVRVYTASQVDNELEAAKRDYLQAAVGITTTNKLIIPKILDWFLLDFAKDLESLLDWVCLQLPVELRKEAVECLERKGRQPLSQLVQMMPYDFSFRLLVHQ 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07107 512 MobiDBLite consensus disorder prediction 122 179 - -
Vifa1g07107 512 Pfam Leucine-zipper of ternary complex factor MIP1 19 100 IPR025757 -
Vifa1g07107 512 Coils Coil 16 50 - -
Vifa1g07107 512 MobiDBLite consensus disorder prediction 114 179 - -
Vifa1g07107 512 MobiDBLite consensus disorder prediction 1 23 - -
Vifa1g07107 512 Coils Coil 69 96 - -
Vifa1g07107 512 PANTHER EXPRESSED PROTEIN 11 511 - -
Vifa1g07107 512 Pfam Protein of unknown function, DUF547 304 433 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07107 Vifa-Chr1 1097237813 1097240348 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07107 1 1097237813 1097240348 Vifa1g07107 1 1097237813 1097240348 ECH
Vifa1g07107 1 1097237813 1097240348 Vifa2g03559 2 1036978288 1036981093 PCT
Vifa1g07107 1 1097237813 1097240348 Vifa4g02581 4 785949130 785953051 PCT