Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07069 ATGGCGGATCTATTGAGTGGAGGTGCTGTTGGAGCTGTAATGGGAGAAGTGGTGAAATACACTCTTCAAACAATCAAAAAGGGTCGAGAGTTTGGTCCAACACTCGAAACAAACATAGAAACTCTAAAAGCTTTGGCTCCTATAGTTGAAGAAATGAAAGATTACAACGATTTGTTGGATCGACCAAGAGGAGAGATAGAGAGGCTAGAGAAACGCATAAGAGAAGGTGAAGAGCTTGTAAAGGTATGCAAGAAGCTTACTCTTTGGAACTTTTTCTCTTTTCCAAGTTACCAAGGTAAGCTTCAGAAGAAAGACAAGGAGCTTCAGAGACATTTGGCTGTTAATGTTCAAATTGAGAATAAAAGGGATTTGATTGTGCTTTCTGCTAAGGTGGATGGAATTTTGGATGTTTTGACCAAAATGGTGAATTCTGGTCAGTTTGATGGGAATCAGATTGGAGGTTTGTGTGGTGCTCCGGATGAGCCCGAGTGTTTGGGAATGGGTGAGGCTTTGAATAAGTTGAAGATTGAATTGATGAAAGATGGTGTTGATGTGCTTGTTTTGACTGGCTTGGGTGGTTCTGGTAAAAGCACTCTTGCTAAAAAGATTTGTTGGCACCCACAAATCAAAGGCAAGTTTGGTGGAAACATCTTCTTTGTTACGGTCTCAAAAAATCCCAACTTGAAGAACATTGTACAGACACTATTTGAGCATTGTGAATGTCGTGTGCCTGAGTTTCAAACTGATGAAGAAGCAATTAACAGATTGGGACTTCTTCTGAGGCAAGTTGGTAGAAATCCAATACTGTTAGTCTTGGATGATGTTTGGCCTAACTCAGAAGGCCTTGTCGAGAAGTTCAAATTCCGAATGAAAGATTATAAGATTTTGGTGACTTCAAGAGTTGCATTTAGAAGATTTGGCACCCCATGCCAGTTGGATCCACTTGGTCATGGTCCTGCAGTGTCCCTTTTCCGTCACTTTGCTCAATTGAATCACAAAAGCTCATACATGCCGGAGAAAAAACTTGTCCGTGAGATAGTGAGAGGTTGTAAGGGTTCGCCGCTGGCGCTTCAGGTCATTGCAGGATCACTTTGTCAGCAGCCTTTTGAGAAGTGGCAAAATATGAAGGAGTTTTTGCAAAGTCAATCCATTCTGGAACTTAATAGCACTAACTTGCTTTGTTTCCTTCAACAAAGCTTGGATATATTGGAGGATATCAATCAAAAAGAGTGCTTCATGGATATGGGACTGTTTCCTGAAGACCAGAGGATTCCTGTTACTATACTTATTGATATGTGGGCAGAACTGTATGATTTAGATGAAGATGGTACAAAAGCAATGGCCATTATCCATGATTTAATCACCAGGAATTTGATTAATGTCATAGCTACAAGGAAAGTTGCAACAGAAACAGACAAGTACTACAATAACCACTATGTCATGATGCATGATCTCCTCAGAGAACTAGCAATTCATCAAAGCAAAGGGGAACCAATTGAACAGAGAAAGAGACTGATCATCGAGTTAAATGGAGATAATCGTCCTGATTGGTGGATAGCACAGAATCAGCAAGGACTCATTAGTCGTGCATACTCGTTCATCTCCGGAATGTTTGTAAAACCGATACAACTAAAAGTTGATGCCCGCGTATTGTCGATATCAACTGATGAAACATTTTCTTCGGATTGGTGTGACATGCAACCTGATGAAGCTGAGGTTCTGGTTTTAAATCTTCGGTCTGACAAGTACTCATTACCAGATTTCACAGAGAAAATGAGTAAACTGAAAGTTTTAATAATCACAAATTATGGTTTCAGTTATTCTGAATTAACCAAGTTTGAGCTACTTGGGTTTTTATTAAACCTGAAAAGAATAAGGTTGGAGAAAGTTTCAGTCCCTTGTCTATGCAGACTGAAGAATCTGCGAAAGTTATCCCTTCATATGTGCAATACGAATAATGCTTTTGAAAGCTGTTCTATCCAAATTTCAGATGCTATGCCAAATCTAGTGGAGTTGAGCATTGACTATTGCAATGATTTGATTAAATTGCCTGATGGAATTTGTAACATTACCACATTGAAGAAGCTCAGTATCACAAACTGCCACAAGCTTTCTGCATTGCCTCAAGATCTTGAAAAATTGGAGAATTTGGAAGTGTTAAGGCTTTGCTCCTGCTCTGATTTAGTAGATATGCCAAAATCTGTTGGAGGCCTTAACAAGCTACGTTGTCTCGACATATCAGACTGTGTGAATCTTCCAAAGTTACCCGACGATATTGGTGACTTGCAAAGGCTTGAGAAGTTTTACATGAAGGGTTGCTCAAAATTGAGTGAATTGCCTTACTCTGTCATCAATTTTGAAAATTTAAAGCATAAAATATCTGTGATTTGTGACGATGAAGCTGCTGCTGCACTGTGGGGACAATTTCCCAACATTCAAAACGTAAAGATAGAGATGCCTGAAGTAGATATTAACTTAAATTTTCTTCATGGAACACGTTCGAGTGTTGTTTCCTTAAGATAA 2523 0.3928 MADLLSGGAVGAVMGEVVKYTLQTIKKGREFGPTLETNIETLKALAPIVEEMKDYNDLLDRPRGEIERLEKRIREGEELVKVCKKLTLWNFFSFPSYQGKLQKKDKELQRHLAVNVQIENKRDLIVLSAKVDGILDVLTKMVNSGQFDGNQIGGLCGAPDEPECLGMGEALNKLKIELMKDGVDVLVLTGLGGSGKSTLAKKICWHPQIKGKFGGNIFFVTVSKNPNLKNIVQTLFEHCECRVPEFQTDEEAINRLGLLLRQVGRNPILLVLDDVWPNSEGLVEKFKFRMKDYKILVTSRVAFRRFGTPCQLDPLGHGPAVSLFRHFAQLNHKSSYMPEKKLVREIVRGCKGSPLALQVIAGSLCQQPFEKWQNMKEFLQSQSILELNSTNLLCFLQQSLDILEDINQKECFMDMGLFPEDQRIPVTILIDMWAELYDLDEDGTKAMAIIHDLITRNLINVIATRKVATETDKYYNNHYVMMHDLLRELAIHQSKGEPIEQRKRLIIELNGDNRPDWWIAQNQQGLISRAYSFISGMFVKPIQLKVDARVLSISTDETFSSDWCDMQPDEAEVLVLNLRSDKYSLPDFTEKMSKLKVLIITNYGFSYSELTKFELLGFLLNLKRIRLEKVSVPCLCRLKNLRKLSLHMCNTNNAFESCSIQISDAMPNLVELSIDYCNDLIKLPDGICNITTLKKLSITNCHKLSALPQDLEKLENLEVLRLCSCSDLVDMPKSVGGLNKLRCLDISDCVNLPKLPDDIGDLQRLEKFYMKGCSKLSELPYSVINFENLKHKISVICDDEAAAALWGQFPNIQNVKIEMPEVDINLNFLHGTRSSVVSLR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07069 840 Gene3D - 315 394 IPR042197 -
Vifa1g07069 840 PRINTS Disease resistance protein signature 262 276 - -
Vifa1g07069 840 PRINTS Disease resistance protein signature 350 364 - -
Vifa1g07069 840 PRINTS Disease resistance protein signature 185 200 - -
Vifa1g07069 840 PRINTS Disease resistance protein signature 736 752 - -
Vifa1g07069 840 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 829 IPR039203 GO:0050832
Vifa1g07069 840 Gene3D Ribonuclease Inhibitor 554 800 IPR032675 -
Vifa1g07069 840 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Vifa1g07069 840 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 124 IPR008808 -
Vifa1g07069 840 Gene3D - 396 493 IPR036388 -
Vifa1g07069 840 Gene3D - 158 305 IPR027417 -
Vifa1g07069 840 Coils Coil 66 86 - -
Vifa1g07069 840 SUPERFAMILY RNI-like 581 791 - -
Vifa1g07069 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 414 IPR027417 -
Vifa1g07069 840 Pfam NB-ARC domain 171 389 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07069 Vifa-Chr1 1091453862 1091461608 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07069 1 1091453862 1091461608 Vifa4g02555 4 773854105 773857291 PCT