Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06958 ATGGTAACATCCATGATCATCACTATTTTTCTCTTCTTCCTCTTCTCAATTCATCATCATCATGTCACGTGCACCACCACAACCACAACCGCCACTACTCAACGCTTTAAACAAGCACCTAAATTCTACAACTCCCCAAACTGCCCCTCACAACCCCTCGACGCTACGTGCTCCGACGAATCTGTCCACGTCGCAATGACACTCGACGTAAAATACCTCCGCGGCTCCATGGCCGCTATTCTCTCCGTTCTTCAACACTCTTCATGTCCGGAAAACATCATCTTCCATTTCGTCACCGCCGCGTCGAAATCCAAAACCTCCACCGTCATCCTCAACACTACACTCACGAACTCGTTTCCATATTTAAAATTCCAAATATACCCCTTCGACGATAGCACTGTTTCGGGTTTGATTTCTACTTCAATCCGTTCAGCGCTCGATTGTCCTCTCAACTACGCGCGAAGTTACATGGCTAACCTTCTTCCCGATTGCGTACGGAAGATCGTTTACCTTGATTCCGATCTGATCCTCATCGACGACATTGCGAAACTCGCTGCAACGCGGTTTACCAACGACGCTGTTTTAGCTGCACCGGAGTATTGTAACGCCAATTTCACTAACTATTTTACTCCGACGTTTTGGTCGAATCCTTCTCTTTCGATGACGTTCGCGAACCGTAAGGCTTGTTACTTCAACACCGGAGTTATGGTTATTGATTTGGAGAAATGGAGGATTGGAGGATATACGGAGGAAATTCAGGAATGGATGGAGCTTCAGAAGAGAATGAGGATCTATGAGCTTGGTTCGTTGCCGCCGTTTTTGCTTGTTTTCGCCGGGAGAATTGTTCCGGTTGATCACAGGTGGAATCAGCATGGGCTCGGCGGTGATAATTTCCGTGGGCTTTGTAGAGGCTTGCATCCCGGGCCGGTTAGTCTTATGCATTGGAGTGGGAAGGGTAAACCGTGGGTCAGGCTTGACGCAAAACGTCCTTGCCCGTTGGATGCTTTGTGGGACCCGTATGACCTTCTAGAAACACCTTTTGCTCTTGAGACCTAG 1056 0.482 MVTSMIITIFLFFLFSIHHHHVTCTTTTTTATTQRFKQAPKFYNSPNCPSQPLDATCSDESVHVAMTLDVKYLRGSMAAILSVLQHSSCPENIIFHFVTAASKSKTSTVILNTTLTNSFPYLKFQIYPFDDSTVSGLISTSIRSALDCPLNYARSYMANLLPDCVRKIVYLDSDLILIDDIAKLAATRFTNDAVLAAPEYCNANFTNYFTPTFWSNPSLSMTFANRKACYFNTGVMVIDLEKWRIGGYTEEIQEWMELQKRMRIYELGSLPPFLLVFAGRIVPVDHRWNQHGLGGDNFRGLCRGLHPGPVSLMHWSGKGKPWVRLDAKRPCPLDALWDPYDLLETPFALET 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06958 351 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 7 344 - -
Vifa1g06958 351 FunFam Hexosyltransferase 63 331 - -
Vifa1g06958 351 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 63 330 IPR029044 -
Vifa1g06958 351 Pfam Glycosyl transferase family 8 63 324 IPR002495 GO:0016757
Vifa1g06958 351 SUPERFAMILY Nucleotide-diphospho-sugar transferases 62 342 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06958 Vifa-Chr1 1073833629 1073834684 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06958 1 1073833629 1073834684 Vifa1g06958 1 1073833629 1073834684 ECH
Vifa4g02504 4 756049527 756050576 Vifa1g06958 1 1073833629 1073834684 ECH
Vifa1g06958 1 1073833629 1073834684 Vifa2g04352 2 1279675888 1279676904 PCT
Vifa1g06958 1 1073833629 1073834684 Vifa4g02504 4 756049527 756050576 PCT