Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06906 ATGCTATGTGCTTCGTTTTTATCGAATTCGACTAGTTGCTTGAATAGGAAGAAAGTTGTTGGAAAATTAATGGCTTCTTCATCTTCCAATGCTATGTTTGGAGATGTTTATGTTGATGATTTGATTTCAAACTATGGTGGTGTTCAAGACTTAACAACAAAACATGCTGGTGTGTACTTTAAAGAAAGAACTCGTAAACAGTTTGTGAGAGCTAGTGTGAGTTTGAGAAGAACACAACAACTTTTGTATGGTCCTTTAAATTTCGGGCGTTCAAGTTTTGATGCTAATTGGAGGATTCAGAATTCGGTTTTGCTTCATGGGCCGTGGTTGAAGAGTTTATCTAGCTCTTCTTCTGCTTGCTGCTTAGCTGGGGCTGCGCACGATCTCTCTTTTGATAACAGTCCTCGTGATGAACAGTTGGAAAATCCCTCTACTTTGCCTAACTTAACTACCCTTGATCGCAAGCCATTGAAGATGTTATCAGGATCATGTTACCTGCCACATCCAGCTAAAGTTGCTACAGGGGGAGAAGATGCTCATTTTATTTGCTCAGATGAACAAGCTATTGGTGTTGCAGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATGCAGGATTGTTTGCCCAGGAACTCATATCCAATTCAGTAAGAGCAGTTCAAGAGGAGCCCAAAGGTTCTTTTAATCCAGTAAGGGTTTTAGAGAAGGCTCACTCAAATACAAAGGCCAGGGGTTCATCTACTGCTTGCATCATTGCTCTTACCAATGAGGCACTAAATGCTATTAATTTGGGCGACAGTGGATTCATTGTGATTCGAGGTGGTAGCATAATTTTCAAGTCTCCTGTTCAACAACACGACTTCAACTTCACATATCAATTGGAGAGGGGTAATACAGGCGATCTCCCCAGCTCTGGCGAGGTTTTCACAATACCTGTTTCCCCAGGAGATATCATTGTTGCTGGAACAGATGGCTTATTTGACAACTTGTACAACAATGATATTGTTGGTGTGGTTGTAAGTTCAACTAGAGCTGGATTAGAACCACAAGCAACTGCTCAAAAGATAGCAGCATTGGCTCAAGAGCGAGCACTTGACAAGAAGAGGCACTCGCCGTTTTCAACTGCTGCTCTCGAGTCTGGATACCGATTTTATGGTGGCAAGCTTGATGACATAACAGTTGTGGTTTCTTACATATCCAGCTCAGTGAGTGAGTGA 1218 0.422 MLCASFLSNSTSCLNRKKVVGKLMASSSSNAMFGDVYVDDLISNYGGVQDLTTKHAGVYFKERTRKQFVRASVSLRRTQQLLYGPLNFGRSSFDANWRIQNSVLLHGPWLKSLSSSSSACCLAGAAHDLSFDNSPRDEQLENPSTLPNLTTLDRKPLKMLSGSCYLPHPAKVATGGEDAHFICSDEQAIGVADGVGGWADVGVNAGLFAQELISNSVRAVQEEPKGSFNPVRVLEKAHSNTKARGSSTACIIALTNEALNAINLGDSGFIVIRGGSIIFKSPVQQHDFNFTYQLERGNTGDLPSSGEVFTIPVSPGDIIVAGTDGLFDNLYNNDIVGVVVSSTRAGLEPQATAQKIAALAQERALDKKRHSPFSTAALESGYRFYGGKLDDITVVVSYISSSVSE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06906 405 SMART PP2C_SIG_2 167 399 IPR001932 -
Vifa1g06906 405 SUPERFAMILY PP2C-like 163 397 IPR036457 -
Vifa1g06906 405 FunFam 5-azacytidine resistance protein azr1 168 293 - -
Vifa1g06906 405 PANTHER PROTEIN PHOSPHATASE 2C 144 402 IPR039123 -
Vifa1g06906 405 Gene3D - 164 399 IPR036457 -
Vifa1g06906 405 Pfam Stage II sporulation protein E (SpoIIE) 187 397 IPR001932 -
Vifa1g06906 405 ProSiteProfiles PPM-type phosphatase domain profile. 160 399 IPR001932 -
Vifa1g06906 405 SMART PP2C_4 150 397 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06906 Vifa-Chr1 1064897710 1064900668 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06906 1 1064897710 1064900668 Vifa1g06906 1 1064897710 1064900668 ECH