Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05528 ATGTCCGCCGAGAAAGAGAGAGAAACCCAAGTTTACATGGCCAAGCTTTCCGAACAGGCTGAGAGATACGAAGAGATGGTTGAATGTATGAAGAAAGTTGCGAAACTTGATGTTGAACTAACGGTGGAAGAGAGGAACCTCCTTTCAGTGGGATATAAAAATGTCATTGGTGCACGAAGAGCCTCATGGCGTATTATGTCATCGATTGAGCAGAAGGAAGAGTCTAAGGGTAATGAGCACAATGTTAAACTGATCAAGAGTTACTGCCAAAAGGTTGAGGAGGAACTCTCCAAAATCTGTGGTGACATTCTGACTATTATAGATCAGCACTTGGTTCCTTCTTCCACCTCAGCTGAAGCTAATGTTTTCTATCATAAGATGAAAGGTGATTATTTCCGGTATCTTGCTGAGTTCAAGACTGACCAAGAAAGGAAAGAGGCCGCTGAGCAGTCACTTAAAGGATATGAGGCTGCTTCAGCCACTGCAAACACTGATCTTCCATCAACACATCCAATTCGTCTTGGACTTGCACTCAACTTCTCTGTCTTTTATTATGAGATTATGAACTCTCCTGAAAGGGCTTGCCATTTGGCCAAACAAGCTTTTGATGAAGCGATTGCAGAGTTGGATACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTGTGGACCTCCGATTTGCCCGAGGATGGAGGTGAGGACAGCATAAAAGCTGAAGAAGCCAAACCCACTGAGCCTGAGCATTGA 780 0.441 MSAEKERETQVYMAKLSEQAERYEEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELSKICGDILTIIDQHLVPSSTSAEANVFYHKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDSIKAEEAKPTEPEH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05528 259 MobiDBLite consensus disorder prediction 241 259 - -
Vifa1g05528 259 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Vifa1g05528 259 Coils Coil 13 33 - -
Vifa1g05528 259 PIRSF 14-3-3 1 247 IPR000308 -
Vifa1g05528 259 SMART 1433_4 7 249 IPR023410 -
Vifa1g05528 259 Coils Coil 195 215 - -
Vifa1g05528 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Vifa1g05528 259 FunFam 14-3-3 protein epsilon 1 249 - -
Vifa1g05528 259 MobiDBLite consensus disorder prediction 237 259 - -
Vifa1g05528 259 Pfam 14-3-3 protein 13 235 IPR023410 -
Vifa1g05528 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Vifa1g05528 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Vifa1g05528 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Vifa1g05528 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Vifa1g05528 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Vifa1g05528 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Vifa1g05528 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Vifa1g05528 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Vifa1g05528 259 Gene3D - 1 248 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05528 Vifa-Chr1 858001079 858004117 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05528 1 858001079 858004117 Vifa1g05528 1 858001079 858004117 ECH