Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g05491 ATGGGTTTTTTCATGGCAATTTTTGGTGTTTTTTTCATTCTCTGTTTATGCTCTGCTCTTTTGCGATGGAACGAACTAAGATATAGGAAGAAAGGCTTACCTCCTGGCACAATGGGATGGCCACTTTTTGGAGAGACAACAGAGTTTCTGAAACAAGGTCCAAATTTCATGAAAAATCAAAGATTAAGGTTTGGAAGTTTTTTCAAATCACATATACTTGGTTGTCCTACAATAGTTTCAATGGATGCAGAGGTTAATAGATACATATTAATGAATGAATCAAAGGGTCTTGTTCCTGGATATCCTCAATCTATGTTGGATATCTTAGGAAAATGTAATATTGCAGCTGTTCATGGCTCTACTCACAAGTATTTGAGAGGAGCACTTCATTCTATTATTAGTCCAAGTATGATTAGAGATCAAATTTTGCCTAAAATTGATGCCTTTATGAGTTTTCAATTGAGTAATTGGGATGACAAAATCATCAACATTCAAGAGAAAACTAAAGAGATGGTGTTTCTGTCATCTTTGAAGCAGATTGCAAGTATAGACTCAAACTCAAAAATTGCTGAATCTTTCAAGACAGAGTTTTTTAAACTTGTCTTAGGAACCATTTCTCTACCTATTAATCTCCCCGGAACAAATTACCACCATGGATTTCAGGCAAGGAAGAACATAATTAACATTTTGAGACAGTTACTAAAGGAAAGAAGAGCAACAAATGAAAGTCACAAAGACATTCTTGGTTGTTTAATGGAAAATGAAGAAAATAAGTATAAATTAAGTGATGAAGAAATAATTGACTTAGTGATTACACTCATGTATTCTGGTTATGAAACTGTTTCAACCACCTCAATGATGGCAGTGAAGTACCTCCATGATCATCCCAAAGCTCTTGAAGAAATTAGAAAAGAGCATTTGGCTATAAGAGAGAGGAAAAAACCAAATGAACCAATTGATTTCAATGATATCAAATCAATGAAGTTTACTCGTGCGGTGATTTTTGAGACATCTAGATTGGCTACAATAGTTAATGGAGTTCTAAGGAAAACCACTCAAGATTTGCAATTAAATGGATATTTGATTCCTAAAGGATGGAGAATATATGTGTATACAAGAGAGATAAATTATGATCCTTTTTTATATCCTGAACCATTAGCATTTAATCCATGGAGATGGATGGATAAAAGTTTGGAATCACAAAATTATTTCTTGATATTTGGAGGTGGCACTAGACATTGTCCAGGAAAAGAGGCAGGAATCACAGAAATTTCAACTTTCTTACACTATCTTCTAACTAGATACAGGTGGGAAGAAACAGGAGGAGATAAATTAATGAAGTTTCCTAGAGTTCAAGCACCAAATGGATTGCACATGAAATTTTCATCTTATAATAACTAG 1401 0.3383 MGFFMAIFGVFFILCLCSALLRWNELRYRKKGLPPGTMGWPLFGETTEFLKQGPNFMKNQRLRFGSFFKSHILGCPTIVSMDAEVNRYILMNESKGLVPGYPQSMLDILGKCNIAAVHGSTHKYLRGALHSIISPSMIRDQILPKIDAFMSFQLSNWDDKIINIQEKTKEMVFLSSLKQIASIDSNSKIAESFKTEFFKLVLGTISLPINLPGTNYHHGFQARKNIINILRQLLKERRATNESHKDILGCLMENEENKYKLSDEEIIDLVITLMYSGYETVSTTSMMAVKYLHDHPKALEEIRKEHLAIRERKKPNEPIDFNDIKSMKFTRAVIFETSRLATIVNGVLRKTTQDLQLNGYLIPKGWRIYVYTREINYDPFLYPEPLAFNPWRWMDKSLESQNYFLIFGGGTRHCPGKEAGITEISTFLHYLLTRYRWEETGGDKLMKFPRVQAPNGLHMKFSSYNN 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g05491 466 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 Gene3D Cytochrome P450 24 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 FunFam Cytochrome P450 85A1 24 463 - -
Vifa1g05491 466 CDD CYP90-like 60 462 - -
Vifa1g05491 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Vifa1g05491 466 Pfam Cytochrome P450 34 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g05491 466 PANTHER CYTOCHROME P450 26 30 440 - -
Vifa1g05491 466 SUPERFAMILY Cytochrome P450 26 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g05491 Vifa-Chr1 852209863 852212749 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g05491 1 852209863 852212749 Vifa1g05491 1 852209863 852212749 ECH
Vifa1g00358 1 57583376 57586622 Vifa1g05491 1 852209863 852212749 PCT