Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04472 ATGCATAAATTGGGGAGAGGTCATAGAGATAAACTCCAGCAGTTTGTAACAATAACTGGAGCTAGCGAGAAAGTAGCATTGCAGGCTCTGAAGGCTAGTGATTGGCATCTTGAAGGAGCATTTGATTATTTTTACAGCCAGCCTCAGCTTAGAAACGTAACTGATTCTAGACACTTGGAGGAGCTATACAATAGATATAAAGATCAATACGTCGATATGATTTTTGTAGACGGCATTACTCTCCTTTGCAACGATATCCAGGTGGATCCTCAAGACATCGTAATGTTAGTTCTTTCATGGCACATGAAGGCTGGCACTATGTGTGAATTTTCCAAGAAGGAGTTCATTGAAGGCTTACAATCTCTGGGGGTTGATTCGCTGGAGAAGTTCCGTGAAAAGATACCATATATGCGCTCTGAGCTGAAAGATGAACAAAAATTTCGTGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAGAAGGGTCAAAAATCTCTGGCATTGGATACAGCTATTGGAATGTGGCAATTATTATTTGCCGAGAAGCAGTGGCCACTGGTTGATCATTGGTGCCAGTTCCTACAGGCTCGACACAACAAAGCAATACCGAGGGATACATGGTCTCAACTTTTGGAGTTTGCAAAGACTGTTAGCTCTAATTTAACTGATTACGATGCTGAAGGTGCTTGGCCGTATCTCATTGATGAGTTTGTCGACTATCTGAACGAGAATGGTGTTGACCAACACGGTCAGATCAATGATTCAAGTCTAAAACAATGA 780 0.4154 MHKLGRGHRDKLQQFVTITGASEKVALQALKASDWHLEGAFDYFYSQPQLRNVTDSRHLEELYNRYKDQYVDMIFVDGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQSLGVDSLEKFREKIPYMRSELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQARHNKAIPRDTWSQLLEFAKTVSSNLTDYDAEGAWPYLIDEFVDYLNENGVDQHGQINDSSLKQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04472 259 FunFam Defective in cullin neddylation protein 53 142 - -
Vifa1g04472 259 FunFam Defective in cullin neddylation protein 143 248 - -
Vifa1g04472 259 Gene3D - 6 47 - -
Vifa1g04472 259 SUPERFAMILY UBA-like 7 46 IPR009060 GO:0005515
Vifa1g04472 259 ProSiteProfiles DCUN1 domain profile. 54 242 IPR005176 -
Vifa1g04472 259 CDD UBA_DCNL 8 48 - -
Vifa1g04472 259 Gene3D Cullin, PONY binding domain 143 251 IPR042460 -
Vifa1g04472 259 Pfam Cullin binding 130 240 IPR005176 -
Vifa1g04472 259 Gene3D - 52 142 - -
Vifa1g04472 259 Pfam UBA-like domain 9 47 - -
Vifa1g04472 259 PANTHER RP42 RELATED 22 245 IPR014764 -
Vifa1g04472 259 FunFam Defective in cullin neddylation protein 6 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04472 Vifa-Chr1 694298857 694305622 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04472 1 694298857 694305622 Vifa1g04472 1 694298857 694305622 ECH