Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02793 ATGTGTTTGATGATGTTTGATGACAAGAGGTTCTGTGGTTCCCATGGAGAAGGAGATATTTTCATCAGGCAAACCTTGCCTGATACGGTGGTTGAGGATGATTATAATGATGAAGAAATGGATGTAGATGAGCTTGAGAGAAGGATGTGGAGGGATAAAATGCGTCTAAAGCGATTGAAAGAACAAACCAATTCTAGAGAAGGGATTGATGCAGCAAAAGAAAGGCAGTTTCAAGAACATGCAAGGATGAAAAAGATGTCAAGAGCTCAAGAACATGCAATGAGGAAAAAGACGTCAAGAGCTCAAGATGGAATATTCAAGTATAAACCAAAGCTAAAGAAGAAATTTGTGATACTGCAATATTAA 366 0.3798 MCLMMFDDKRFCGSHGEGDIFIRQTLPDTVVEDDYNDEEMDVDELERRMWRDKMRLKRLKEQTNSREGIDAAKERQFQEHARMKKMSRAQEHAMRKKTSRAQDGIFKYKPKLKKKFVILQY 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02793 121 Pfam Ethylene insensitive 3 43 112 IPR047091 GO:0003700
Vifa1g02793 121 Coils Coil 42 62 - -
Vifa1g02793 121 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 28 91 IPR006957 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02793 Vifa-Chr1 434669585 434669950 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02793 4 108 EIL Transcription Factor Family AT3G20770 57.018 1.23e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vifa1g02793 EIN3 1.4e-10 No_clan