Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02785 ATGTTTGATGACATGGGGTTTTGTGGTGTTTTGGATATGTTTTGTGGTACACTTGGGGAAGGGGATATTTATGTCAGACAAACTGAGTCGAATTCGGTAGTTGAGGATGATTACAGTGATGAAGAAATGGATGTGAATGAGCTTGAGCGTAGGATGTGGAGGGACAAAATGCGTCTCAAGCAATTGAAAGAACAAACCAAGGCTAAAGAAGAGATTGATGCGGCCAAGGCAAGGCAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCGAGAGCTCAAGATGGAATATTGAAGTACATGCTGAAAACGATGGAGGTTTGTAAGGCACAAGGATTTGTTTATGGGATAATTCCTGAGAAGGGAAAACCGGTGACCGGAGCATCTGACAATCTTCGTGAATGGTGGAAGGATAAGGTTAGGTTCGATAGGAATGGTCCGACTGCGATAGCTAAATATCAAGTGGATAACGCAATTCCAGGGAAGAATGATGGTTGCAATTCCATCGGTCCTACTCCTCATACCTTACAAGAACTACAGGACACAACCTTAGGTTCTCTCTTATCAGCACTTATGCAGCACTGTGATCCTCCTCAGAGGCGTTTCCCATTAGAGAAGGGTCTTCCTCCGCCATGGTGGCCAAGCGAGACCGAAGAGTGGTGGCCCCAAATTGGTTTACCTAAAGATCAAGGCCCTCCACCTTACAAGAAACCTCATGACCTGAAAAAAGCATGGAAAGTTGGTGTTTTAACTGCGGTTATCAAGCATATGTCTTCTGATATAGCCAAGATTCTCAAGCTCGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACGGCCAAAGAAAGTGCTACCTGGCCGGCCATCATCAATCAAGAGGAGTCCTTAGCTCGAGAGCTTTATCCTGATTATTGCCCTTCGATGTCTTCTGGTGGAGGCAGCGGTTCTGTGGTCATCAATGATTGCAGCGAGTATGATGTTGATGGGCCTGAGGGTGAGTCCAATTTTGATGTGGAGGACCGAAAACCCGAGAATCTTCATCCATCCAATCTTGGGATGGAGAGAATGAGGGGAATGTTTTCGGTTCAACAACCTTCTCCACCAATCAAGGGAGAGGTTATCACCAACTTGGATTTCATTCGGAAGAGGAAGATCTCTAGCGACTTCAACTTAATGATGGATCACAAAATCTACACATGTGAACATCCTCAATGCCCTTACAGCGATGTTCGCCTTGCTTTTCAAAACAGGCTTTCTAGGGACAATCATCAATTGAATTGTCCATATAGAATTGGTTCTGTAGATTATGGCGGCCCTAATTTTCATGCTACCGAGGTTAAGCCCGTTATTTTCCCACAAAGCTTTGTTCAACCCAATTCGGCAGCTCAGCCTGCTAGTCTGCAAAGCTTTGTTCAACCCAATTTGGCAGCTCAGCCTGCTAGTCTGCAAAGCTTTGTTCAACCAAATTCTGCAGCTCAACCTACTAGTCTGGTTCCACCTTCATTTGATTTAACCAGACTCGGAGTTTCAGAGGACAGCCAGAAAATGATCAGCGACCTTATGTTAGTCTATGACAAAAATATCATAGGAAACAAGAATGTAAGTTCAACTAATTGCGCAACTGTAGGAAATCAAAATCTTTCTCAGCACAACATTCAACAGCAACAACATGAAATTTCTTTTCTAGTCAAGGAATGGTGA 1698 0.4405 MFDDMGFCGVLDMFCGTLGEGDIYVRQTESNSVVEDDYSDEEMDVNELERRMWRDKMRLKQLKEQTKAKEEIDAAKARQSQEQARRKKMSRAQDGILKYMLKTMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPTAIAKYQVDNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGLPPPWWPSETEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSSDIAKILKLVRQSKCLQDKMTAKESATWPAIINQEESLARELYPDYCPSMSSGGGSGSVVINDCSEYDVDGPEGESNFDVEDRKPENLHPSNLGMERMRGMFSVQQPSPPIKGEVITNLDFIRKRKISSDFNLMMDHKIYTCEHPQCPYSDVRLAFQNRLSRDNHQLNCPYRIGSVDYGGPNFHATEVKPVIFPQSFVQPNSAAQPASLQSFVQPNLAAQPASLQSFVQPNSAAQPTSLVPPSFDLTRLGVSEDSQKMISDLMLVYDKNIIGNKNVSSTNCATVGNQNLSQHNIQQQQHEISFLVKEW 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02785 565 Coils Coil 31 87 - -
Vifa1g02785 565 FunFam Ethylene insensitive 3-like 1 166 303 - -
Vifa1g02785 565 SUPERFAMILY DNA-binding domain of EIN3-like 172 296 IPR023278 GO:0003700|GO:0005634
Vifa1g02785 565 Pfam Ethylene insensitive 3 47 293 IPR047091 GO:0003700
Vifa1g02785 565 MobiDBLite consensus disorder prediction 68 89 - -
Vifa1g02785 565 FunFam Ethylene insensitive 3-like 1 78 156 - -
Vifa1g02785 565 Gene3D - 78 155 IPR023278 GO:0003700|GO:0005634
Vifa1g02785 565 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 30 553 IPR006957 GO:0003700|GO:0005634
Vifa1g02785 565 Gene3D - 170 303 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02785 Vifa-Chr1 434074880 434076577 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02785 1 554 EIL Transcription Factor Family AT3G20770 62.075 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vifa1g02785 EIN3 1e-125 No_clan