Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02782 ATGATGATGTTTGATGACATGGGGTTTTGTGGTGATTTGGATATGTTCTGTGGTACACTTGGGGAAGGGGATATTTCTGTCAGGCAAACTGAGCCGGATTCGGTAGTTGAGGATGATTACAGTGATGAAGAAATGGATGTGGATGAGCTTGAGCGTAGGATGTGGAGGGACAAAATGCGTCTCAAGCGATTGAAAGAACAAACCAAGGCTAAAGAAGGGATTGATGCGGCCAAGGCAAGGCAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCGAGAGCTCAAGATGGAATATTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCACAAGGATTTGTTTACGGGATAATTCCTGAGAAGGGAAAACCGGTGACCGGAGCATCTGACAATCTTCGTGAATGGTGGAAGGATAAGGTTAGGTTCGATAGGAACGGTCCGGCTGCGATAGCTAAATATCAAGTGGATAACGCAATTCCAGGGAAGAATGATGGCTGCAATTCCATCGGTCCTACTCCTCATACCTTACAAGAACTACAGGACACAACCTTAGGTTCTCTCTTATCAGCACTTATGCAGCACTGTGATCCTCCTCAGAGGCGTTTCCCATTAGAGAAGGGTCTTCCTCCGCCATGGTGGCCAAGCGGGACCGAAGAGTGGTGGCCCCAAATTGGTTTACCTAAAGATCAAGGCCCTCCACCTTACAAGAAACCTCATGACCTGAAAAAAGCATGGAAAGTTGGTGTTTTAACTGCAGTTATCAAGCACATGTCTCCTGATATAGCCAAGATTCGCAAGCTCGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACGGCCAAAGAAAGTGCTACCTGGCTGGCCATCATCAATCAAGAGGAGTCCTTAGCTCGAGAGCTTTATCCCGATTATTGCCCTCCGATGTCTTCTGGTGGAGGCAGCGGTTCTATGGTCATCAATGATTGCAGCGAGTATGATGTTGATGGGCCTGAGGATGAGTCCAATTTTGATGTGGAGGACCGAAAACCCGAGAATCTTCATCCATCCAATCTTGGGATGGAGAGAATGAGGGGAATGTTTCCGGTTCAGCAACCTTCTCCACCAATCAAGGGAGAGGTTATCACCAACTTGGATTTCATTCGGAAGAGGAAGATCTCTAGCGACTTCAACTTAATGATGGATCACAAAATCTACACATGTGAACATCCTCAATGCCCTTACAGCGATGTTCGCCTTGCTTTTCAAGACAGGCCTTCTAGGGACAATCATCAATTGAATTGTCCACATAGAATCGGTTCTGCAGATTATGGCGGCCCTAATTTTCATGCTACCGAGGTTAAGCCCGTTATTTTCCCACAAAGCTTTGTTCAACCCAATTCTGCAGCTCAGCCTGCTAGTCTGCAAAGCTTTGTTCAACCAAATTCTGCAGCTCAGCCTACTAGTCTGGTTCCACCTTCATTTGATTTAACCGGACTCGGAGTTTCAGAGGACAGCCAGAAAATGATCAGCGACCTTATGTCAGTCTATGACACAAATATTATAGGAAACAAGAACGCAAATTCAACCAATTGTGCAACCGTCGGAAATCAAAACCTTTCCCAGCACAACATTCAGCAACAACAACAGCACACCATTCAGCAGCAACAACAGGAGAATTTCTTTTCAAGTCAAGGAATGGTGATGGAAGCAGCAAACTTCTTTACTCGCGAGGAAAGTCAATTCGACCGATTCAAAGCTGTAACCACTCCTTTCGAAACCAACCACCCCAACAACAACAATAACCTCCATTTCATGATTGGCTCTCCATGTGATTTGGCATCCTTCGATTTTAGGGAGGATATTCAACAACTACAAGGAGTAGTAGGAATGGAAAATCTTCACAAACAACCAGATGGTCCAACATGGTACAACTGA 1917 0.4528 MMMFDDMGFCGDLDMFCGTLGEGDISVRQTEPDSVVEDDYSDEEMDVDELERRMWRDKMRLKRLKEQTKAKEGIDAAKARQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQVDNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGLPPPWWPSGTEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLARELYPDYCPPMSSGGGSGSMVINDCSEYDVDGPEDESNFDVEDRKPENLHPSNLGMERMRGMFPVQQPSPPIKGEVITNLDFIRKRKISSDFNLMMDHKIYTCEHPQCPYSDVRLAFQDRPSRDNHQLNCPHRIGSADYGGPNFHATEVKPVIFPQSFVQPNSAAQPASLQSFVQPNSAAQPTSLVPPSFDLTGLGVSEDSQKMISDLMSVYDTNIIGNKNANSTNCATVGNQNLSQHNIQQQQQHTIQQQQQENFFSSQGMVMEAANFFTREESQFDRFKAVTTPFETNHPNNNNNLHFMIGSPCDLASFDFREDIQQLQGVVGMENLHKQPDGPTWYN 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02782 638 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Vifa1g02782 638 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 592 IPR006957 GO:0003700|GO:0005634
Vifa1g02782 638 MobiDBLite consensus disorder prediction 330 353 - -
Vifa1g02782 638 Coils Coil 47 67 - -
Vifa1g02782 638 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Vifa1g02782 638 FunFam Ethylene insensitive 3-like 1 168 305 - -
Vifa1g02782 638 FunFam Ethylene insensitive 3-like 1 80 158 - -
Vifa1g02782 638 Pfam Ethylene insensitive 3 48 295 IPR047091 GO:0003700
Vifa1g02782 638 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Vifa1g02782 638 MobiDBLite consensus disorder prediction 70 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02782 Vifa-Chr1 433428526 433430442 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02782 2 637 EIL Transcription Factor Family AT3G20770 59.788 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vifa1g02782 EIN3 2.7e-130 No_clan