Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01701 ATGGAAAAGTCAACGTTATGTTTGGTTAGTACCGTTGTGATTCTTTGTTGTTTCTCTTGCATAAACTATGTGGCATCTGATGCATCTGATCATCGTTATAAAGAAGGTGATTCTGTGCCCTTTTATGCCAACAAAGCGGGACCCTTTCATAATCCCAGCGAGACATACAAATATTTCGATCTTCCCTTTTGCAGACCAGCTAATGTGGAAGAAAAGAAAGAAGATCTTGGTGAAGTTTTGAATGGAGATAGATTAGTTGGGTCTCCTTACAAACTTGATTTCTTGATTAATAAGAAACCTGAGAGCATTTGCAAAAAGATACTAACAAGAAAAGAGGTTGATCAATTTAGACGTGCTGTTTTGAAGGACTATTTTTATCAAATGTACTATGATGATTTGCCAATTTGGGGTTTCCTTGGAAGATTTGAAACTAAAGAAAAAGATGATGATGATGATGACTCAAATGAGGCTACGATTTATCTTTTTAGGCATGTTCATTTTGAGATTCTATACAATAACGATCGTATCATCGATGTTTTCGTTAGAAATGAACCGAATGCTGTTGTGGATTTGACAGAAGATAGAGAGGTAAATGTCGATTTCACGTATTCTGTCAAATGGACTGAAACAGATATTCCTTTCGAGAAAAGGTTGGAGAAATATTCACAAACATCTTCGCTTTCACATCACTTGGAAGTCCATTGGTTTTCGATTATTAACTCTTGTGTTACTGTTCTTCTCTTGACTGGATTCCTTGCCATGATTTTCATGCGTGTACTTAAGAATGATTTTGTCAAGTTTACTCCTGATGAAGAGGCACTTGATGACCAAGAGGAGAGTGGATGGAAATATATCCATGGCGATGTTTTTAGATATCCAAGATTCAAGGCTTTGTTTGCAGCAGCACTTGGAATAGGCTCTCAGTTATTTACACTTGTAATCTTCATCTTTATGCTTGCTCTAGTTGGTGTTTTCTATCCATACAACAGGGGAGCTTTGTTTACTGCACTGGTTGTCATATATGCACTAACGTCCGGTGTTGCCGGTTATTCTGCAGCTTCCTTCTATTACAAGATTGAAGGGAAAAATTGGGTGAAAATTTTGGTGTTAACTGGAAGTCTTTTCTCTGGACCGTTGTTTTTGACATTCAGCTTTCTTAACACTGTTGCTGTTGCCTATAACTCAACTGCAGCATTACCCATTGGAACAATTATGGTTATTTTCCTCATATGGACTCTTGTAACGTCGCCTTTATTGGTATTGGGAGGGATTGCTGGTAAGAATAGCCAATCAGAGTTTCTGGCGCCGTGTCCAACCAACAAGTATCCAAGGGAGATTCCTCAACTACCTTGGTACCGTACAACTCTCACTCAGATGGCTATGGCTGGTTTTTTGCCATTCAGTGCCATTTACATTGAACTCTACTACATATTTTCTAGTATTTGGGGTCATCAGATTTATACCATATACAGCATTTTGTTCATTGTTTTCATCATTCTATTGATTGTCACTGCTTTTGTTAATGTGGCATTGACGTACTTTCAACTTGCTGCTGAGGATCATGAATGGTGGTGGAGGTCTTTCCTTTGTGGTGGATCAACTGGTTTGTTCATATATTCCTACTGCATGTTTTTCTACCATGCAAGATCAGATATGTATGGTTTCATGCAAACCTCGTTCTTTTTCGGCTACATGGCTTGCATTTGCTATGGTTTCTTTCTCATGCTTGGCACTGTCGGTTTCCGAGCTTCTTTAATCTTTGTCAGACACATATACCGTTCCATCAAGTGTGAATAG 1797 0.384 MEKSTLCLVSTVVILCCFSCINYVASDASDHRYKEGDSVPFYANKAGPFHNPSETYKYFDLPFCRPANVEEKKEDLGEVLNGDRLVGSPYKLDFLINKKPESICKKILTRKEVDQFRRAVLKDYFYQMYYDDLPIWGFLGRFETKEKDDDDDDSNEATIYLFRHVHFEILYNNDRIIDVFVRNEPNAVVDLTEDREVNVDFTYSVKWTETDIPFEKRLEKYSQTSSLSHHLEVHWFSIINSCVTVLLLTGFLAMIFMRVLKNDFVKFTPDEEALDDQEESGWKYIHGDVFRYPRFKALFAAALGIGSQLFTLVIFIFMLALVGVFYPYNRGALFTALVVIYALTSGVAGYSAASFYYKIEGKNWVKILVLTGSLFSGPLFLTFSFLNTVAVAYNSTAALPIGTIMVIFLIWTLVTSPLLVLGGIAGKNSQSEFLAPCPTNKYPREIPQLPWYRTTLTQMAMAGFLPFSAIYIELYYIFSSIWGHQIYTIYSILFIVFIILLIVTAFVNVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYSYCMFFYHARSDMYGFMQTSFFFGYMACICYGFFLMLGTVGFRASLIFVRHIYRSIKCE 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01701 598 Pfam Endomembrane protein 70 55 555 IPR004240 GO:0016020
Vifa1g01701 598 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 25 598 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01701 Vifa-Chr1 278940002 278943342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01701 18 598 Miscellaneous Gene Families AT2G01970 75.559 0.0 919
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01701 1 278940002 278943342 Vifa1g01701 1 278940002 278943342 ECH