Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00932 ATGTCACCTGATATCGCAAAAATAAGAAGACACGTTCGTCAATCAAAATGCCTGCAAGACAAGATGACAGCAAAGGAAAGTTCGATTTGGCTAGGGGTGTTAAGTCGAGAAGAAGCTCACATTAGACAGCCTAGTATTGATAATGGTATTTCTGGAATAACCGAGACACTACCTGTTGGTCTTCTCATTGAGAATAAGCAACCTGCTGCTAGTAGTGCTAGCAACTATGATGTCGAGGGTATTGATGACAATGTTGGTTCTGTTTCTTCTAAAGAAGACAAGTGCGCTCATTGTATGGATACTGAGCCATCGGATAACTCGCGAAGGAATTCTGTCCAAGATTGA 345 0.4174 MSPDIAKIRRHVRQSKCLQDKMTAKESSIWLGVLSREEAHIRQPSIDNGISGITETLPVGLLIENKQPAASSASNYDVEGIDDNVGSVSSKEDKCAHCMDTEPSDNSRRNSVQD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00932 114 Gene3D - 1 49 IPR023278 GO:0003700|GO:0005634
Vifa1g00932 114 Pfam Ethylene insensitive 3 1 38 IPR047091 GO:0003700
Vifa1g00932 114 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 105 IPR006957 GO:0003700|GO:0005634
Vifa1g00932 114 MobiDBLite consensus disorder prediction 86 104 - -
Vifa1g00932 114 MobiDBLite consensus disorder prediction 72 114 - -
Vifa1g00932 114 SUPERFAMILY DNA-binding domain of EIN3-like 1 42 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00932 Vifa-Chr1 156906015 156906460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00932 1 104 EIL Transcription Factor Family AT1G73730 55.769 2.04e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vifa1g00932 EIN3 1.8e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00932 1 156906015 156906460 Vifa1g00932 1 156906015 156906460 ECH