Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01726 ATGGGCTGTCGCGAGTCAAGGTGCAGAATCATGAAGGCTCTCTCGCATAAACATTGCACAGGTCACAATTTCTTTGCTTCGAATCGTAGCGCCATGGTTCTCTCCAAAACGGCATCGGAGACGGACGTTTCTGTCCATTCAACCTTCGCCTCTCGCTATGTGCGAACAATTCTTCCCAGGTTCAAGATGGGAGAGCAATCGATCCCGAAGGAAGCGGCGTACCAGATCATAAACGACGAGCTGATGTTAGATGGAAATCCGAGGCTGAACCTGGCGTCGTTTGTGACGACGTGGATGGAGCCTGAATGTGACAAACTCATAATGGCTGCCATTAACAAAAACTACGTGGACATGGATGAGTACCCTGTCACCACTGAACTCCAGGCAAGTACCACGCAATGTTAA 405 0.4963 MGCRESRCRIMKALSHKHCTGHNFFASNRSAMVLSKTASETDVSVHSTFASRYVRTILPRFKMGEQSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQASTTQC 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01726 134 FunFam Glutamate decarboxylase 32 96 - -
Vian7g01726 134 Pfam Pyridoxal-dependent decarboxylase conserved domain 68 130 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vian7g01726 134 Gene3D - 32 96 - -
Vian7g01726 134 SUPERFAMILY PLP-dependent transferases 46 129 IPR015424 -
Vian7g01726 134 PANTHER GLUTAMATE DECARBOXYLASE 32 130 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01726 Vian-Chr7 27040102 27041998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01726 32 128 Calmodulin-binding Proteins AT5G17330 90.722 1.55e-58 186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01726 7 27040102 27041998 Vian7g01726 7 27040102 27041998 ECH
Vian6g00813 6 25194824 25200856 Vian7g01726 7 27040102 27041998 PCT