Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g01686 ATGGGAGACGCAAGTGAAGTGAAAGGGGAATGTTCAGGCAGTGGGAAGGGGAAGAAGATGTTTGAGGAAGAAGAAAATGAAGACAAGTTGTTGGCAGGCGTAGGATACAAAGTGTGTTCCTCGGACATGGTTGACGTGGCACACAAGCTCGACCAATTGGAGATGGTAATGGAGGAAGATGGGATTTCCCATCTCGCCTCCAACACTGTGCATTACGACCCGACCGATCTTTACGGTTGGGTCCAGAACATTCTCAACAACGCGCCCAATCACACCATCACCACCAACAGTAACAACGCTGTCATTCCATCGCCGTTAATCACTGTCCCCGAGAACGATCTAACAGCGATTCCATTGCCATACGTCGAAGATTATCCACAAACAGAAAATCAGAATTGCCACAAGCGATTCAAGAGTTCTTCATCTCCGTTGTGGCCCGCGATTTCATCGGACAACATTCTTCCGGTGGTTCTGGTGGAGGAAGCCGGCGTGTATCTCGTCCATGCACTCATGGCCTGCGCGGAGGCCGTTCAATTAGGAAACGCGAGCCTCGCGTCAAGCCTTGTGAAGCATGCAGGAACCCTCGCTGTGTCGCAAGGAGGTTCAATGGGGAAGGTTGCATCGTTCTTCGCTCAAGCTCTCGCTCGAAGAATCTATGGATTCTATCCTTACGAGACTCTAGACTCTTCCTACTCCGACATGCTTCACACACATTTCTACGAATCGAGCCCGTACCTGAAATTCGCGCACTTCACGGCGAACCACGCAATCCTCGAAGCATTCGCCACCGCGGACACGGTGCATGTCATCGATTTTGGCCTGAAGCAGGGGTTGCAGTGGCCGGCGTTCATGCAAGCACTAGCGGTCCGTCCGGGGGGTCCGCCAGCGTTCCGCCTCAGCGGGATCGGACCGCCGCGGCTCGACGACCCCGATTCCGACACGCTTAGTCAGGTCGGTTTGAAACTGGCGGAACTCGCTCGAAAAATTAGGATTCAATTTGAGTTCCGCGGATTCGTGTGTAACAGTTTAGCTGATCTAGATCCGTCCGTTCTCGACATCCGAGCAGGAGAATTCGTCGCGGTTAACTCTATCTTCGAGCTTCACCGCTTGCTGGCGCGACCTGTTGACATTGAAAAGGTGTTAGCCACGGTTAAGAGGATTAAACCGGAGATTGTTACCGTGGTGGAGCAAGAAGCGAATCACAACGGTCCGGTTTTTCTGGAGCGGTTCACGGAGGCATTGTACTATTACTCTAGTTTGTTTGACTCGATGGAGGGATCGGTGGCGGCGCCGAATGAACAGGCGTTGGTGATGGCGGAGATGTACTTGGGGAGGCAGATATGTAACGTTGTGGCGTGTGAGGGAGATGAACGAGTGGAGAGGCACGAAACGCTGGGTCAGTGGAGAGCGCGGCTCGGTTTGGGCGGGTTGGAACCGGTTCGCATGGGTTCGAACGCGTTTAGACAGGCGAGGATGTTGCTTGGCCTATACCCTGAGGCGGGAGAAGGGTACAGAGTGGAAGAAAACAATGGGTGCCTCTTGCTCGGGTGGCACACGAGGCCACTCGTTGCCTCGTCCGCGTGGAGACTCGCGCCCAATGGTTTGCACCCAGTTAGAGATCAGAATGAGATGAACCAAGATTCCCGATACTGTTAA 1656 0.5356 MGDASEVKGECSGSGKGKKMFEEEENEDKLLAGVGYKVCSSDMVDVAHKLDQLEMVMEEDGISHLASNTVHYDPTDLYGWVQNILNNAPNHTITTNSNNAVIPSPLITVPENDLTAIPLPYVEDYPQTENQNCHKRFKSSSSPLWPAISSDNILPVVLVEEAGVYLVHALMACAEAVQLGNASLASSLVKHAGTLAVSQGGSMGKVASFFAQALARRIYGFYPYETLDSSYSDMLHTHFYESSPYLKFAHFTANHAILEAFATADTVHVIDFGLKQGLQWPAFMQALAVRPGGPPAFRLSGIGPPRLDDPDSDTLSQVGLKLAELARKIRIQFEFRGFVCNSLADLDPSVLDIRAGEFVAVNSIFELHRLLARPVDIEKVLATVKRIKPEIVTVVEQEANHNGPVFLERFTEALYYYSSLFDSMEGSVAAPNEQALVMAEMYLGRQICNVVACEGDERVERHETLGQWRARLGLGGLEPVRMGSNAFRQARMLLGLYPEAGEGYRVEENNGCLLLGWHTRPLVASSAWRLAPNGLHPVRDQNEMNQDSRYC 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g01686 551 Pfam GRAS domain family 166 529 IPR005202 -
Vian7g01686 551 MobiDBLite consensus disorder prediction 1 22 - -
Vian7g01686 551 ProSiteProfiles GRAS family profile. 157 529 IPR005202 -
Vian7g01686 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 132 524 IPR005202 -
Vian7g01686 551 Gene3D - 26 87 IPR038088 -
Vian7g01686 551 SMART DELLA_2 28 98 - -
Vian7g01686 551 Pfam Transcriptional regulator DELLA protein N terminal 28 87 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g01686 Vian-Chr7 26463139 26464794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g01686 20 531 GRAS Transcription Factor Family AT2G01570 55.437 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian7g01686 GRAS 4.3e-129 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01686 7 26463139 26464794 Vian7g01686 7 26463139 26464794 ECH
Vian2g02659 2 47416044 47417822 Vian7g01686 7 26463139 26464794 PCT