Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00934 ATGGGAGTGGGATTCTCAAAGGTGTTAACACACACAACAGACGATGAAATTCCAATTTCTTCGACAGATTCTGCTCCTCAACTCACCTACAAACAACCTAGGAAAAACCTGCCTTTTCCACGTTCTCTTGTTCCTCCTCCCATGCCAACCCAATGTTCTTCACAGACAGGACCTGTTCTTGGGAAGCCTTACGTTAAAATAAAGCACACGTACGAGATGAAGCAAGAGCTGGGAAGAGGCAAGTTTGGCGTGACTTATCTGTGTGTAGAGAAGGCCACAGGAATTTCTTATGCATGCAAATCCATAGCAAAGAAGGGTCCGCAAGAAGTTGAGAATGTTAGAAGAGAAGTTATGATTCTGCAGCATCTTTCGGGGCAACATAACATAGTGGAATTCAAGGGAGCTTACGAGGATAGGGAGAACGTGCATCTGGTGATGGAATTGTGCAGTGGAGGTGAACTCTTTGACCGTATTGTTGCAAAAGGCAGACACTCGGAGCGTGAAGCAGCCACTGTGATGAGACAGATTGTGAAGGTGGTCGACGTGTGTCATATCATGGGTGTGATGCATCGAGACCTCAAGCCAGAGAATTTCTTGTTCGCCACCAAGGACGAGGATGCCCCTTTGAAACTCACGGATTTTGGATCCTCTGTCTTCTTTCACACTGGTGAGGTGTATAAAGATATTGTTGGAAATGCATATTACATGGCTCCTGAGGTTTTGAAACGAAATTACGGAAAGGAGATAGATGTTTGGAATGCAGGAGTCATTTTATACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGCTGAAACCGAGAAAGGCGTGTTTGATGATGTTTTGGGTGTTAAGTTAGATATGGATAGCGAGCCATGGCCTTCTACATCAGACGCTGCAAAAGATCTGATCAGAAAAATGCTTACTTATGACCCTAAGGAACGGATTACAGCTGCTGAGGCCCTTGAACATCCATGGTTGAAAGAAGGTGGTGAAGCATCAGAAAAGCATCCAGACAGTGCTGTTTTAAGTAGGATGGAAAAGTTTAAAGCAATGAACCAGATGAAGAAGCTTGCAATGAAGGTAATAGCAGAAAATCTTTCAGAGGAAGAAACAAAGGGCCCCAGACAAATGTTCAACAATATGGATACTGACGGCAGTGGCACTATCACATTTGAAGAACTCAAATCTGGATTATCCAGATTGGGTTCCCTGCCTAGTGAATCTGAAATAAGGCAGCTATTGAATGCTATTGGTAATGACAAGAATGGAACAATTAACTATTATGAATTCGTTGCTGCCACCATGGATCGACACAGACTGGAGAAGGGGGGGAGTTTGTTCAAGGCTTTTCATTACTTTGACAAGGATGACAAGGGTTATATAACGAGAGATGAACTTAGGGAAGCTATCACTGTACACCAAATGGGAGATGAAGCTACGATAGATGGAGTCTTCGAGGATGTAGACTCTGACAAAGATGGGAAAATTAACTATGAGGAATTTATGAGCATGATGAGAAACGAATGCTGA 1530 0.434 MGVGFSKVLTHTTDDEIPISSTDSAPQLTYKQPRKNLPFPRSLVPPPMPTQCSSQTGPVLGKPYVKIKHTYEMKQELGRGKFGVTYLCVEKATGISYACKSIAKKGPQEVENVRREVMILQHLSGQHNIVEFKGAYEDRENVHLVMELCSGGELFDRIVAKGRHSEREAATVMRQIVKVVDVCHIMGVMHRDLKPENFLFATKDEDAPLKLTDFGSSVFFHTGEVYKDIVGNAYYMAPEVLKRNYGKEIDVWNAGVILYILLSGVPPFWAETEKGVFDDVLGVKLDMDSEPWPSTSDAAKDLIRKMLTYDPKERITAAEALEHPWLKEGGEASEKHPDSAVLSRMEKFKAMNQMKKLAMKVIAENLSEEETKGPRQMFNNMDTDGSGTITFEELKSGLSRLGSLPSESEIRQLLNAIGNDKNGTINYYEFVAATMDRHRLEKGGSLFKAFHYFDKDDKGYITRDELREAITVHQMGDEATIDGVFEDVDSDKDGKINYEEFMSMMRNEC 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00934 509 FunFam Calcium-dependent protein kinase 1 73 153 - -
Vian7g00934 509 MobiDBLite consensus disorder prediction 16 31 - -
Vian7g00934 509 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Vian7g00934 509 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Vian7g00934 509 Gene3D - 352 505 - -
Vian7g00934 509 ProSiteProfiles EF-hand calcium-binding domain profile. 441 475 IPR002048 GO:0005509
Vian7g00934 509 ProSiteProfiles EF-hand calcium-binding domain profile. 405 440 IPR002048 GO:0005509
Vian7g00934 509 ProSiteProfiles EF-hand calcium-binding domain profile. 476 509 IPR002048 GO:0005509
Vian7g00934 509 SUPERFAMILY EF-hand 365 505 IPR011992 -
Vian7g00934 509 PANTHER SERINE/THREONINE-PROTEIN KINASE 67 501 - -
Vian7g00934 509 MobiDBLite consensus disorder prediction 16 37 - -
Vian7g00934 509 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Vian7g00934 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Vian7g00934 509 ProSitePatterns Protein kinases ATP-binding region signature. 77 105 IPR017441 GO:0005524
Vian7g00934 509 Gene3D Phosphorylase Kinase; domain 1 73 153 - -
Vian7g00934 509 FunFam Calmodulin 1 363 508 - -
Vian7g00934 509 CDD STKc_CAMK 71 325 - -
Vian7g00934 509 FunFam calcium-dependent protein kinase 1 154 333 - -
Vian7g00934 509 ProSiteProfiles Protein kinase domain profile. 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00934 509 SMART serkin_6 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00934 509 Pfam EF-hand domain pair 375 434 IPR002048 GO:0005509
Vian7g00934 509 Pfam EF-hand domain pair 446 506 IPR002048 GO:0005509
Vian7g00934 509 Pfam Protein kinase domain 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00934 509 SMART efh_1 480 508 IPR002048 GO:0005509
Vian7g00934 509 SMART efh_1 373 401 IPR002048 GO:0005509
Vian7g00934 509 SMART efh_1 409 437 IPR002048 GO:0005509
Vian7g00934 509 SMART efh_1 445 473 IPR002048 GO:0005509
Vian7g00934 509 SUPERFAMILY Protein kinase-like (PK-like) 54 347 IPR011009 -
Vian7g00934 509 Gene3D - 345 435 - -
Vian7g00934 509 Gene3D Transferase(Phosphotransferase) domain 1 154 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00934 Vian-Chr7 17580371 17583058 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vian7g00934 Pkinase 2.4e-73 CL0016