Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00914 ATGGATATTATCATCAACTCTCTCTATAGTAACAAGGATATCTTCCTCAGAGAGTTGATTTCCAATGCTTCTGACGCTTTGGACAAGATTAGGTTCCTCTCTCTCACGGACAAGGAGGTTTTGGGAGAAGGTGATAACACCAAGCTTGATATTCAGATTAAATTAGACAAGGAAAAGAAAATTCTCTCGATCAGAGACCGGGGTATTGGTATGACGAAGGAGGATTTGATTAAGAATTTGGGAACAATTGCTAAATCTGGAACTTCAGCATTTGTTGAGAAAATGCAAACAAGTGGAGATCTCAATCTCATTGGGCAGTTTGGTGTCGGCTTTTACTCTGTGTATCTCGTGGCTGACTATGTTGAAGTTATTAGCAAGCATAATGAGGATAAGCAGTATGTATGGGAATCAAAAGCTGATGGAGCTTTCGCAATCTCGGAAGATACATGGAACGAACCTCTAGGACGTGGAACCGAGATTAGACTACACCTCAAAGAAGAGGCTGGGGAGTACTTAGAGGAATCTAAACTGAAAGAATTGGTGAAGAGGTACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCAAGCAAAGAGGTTGATGTGGAGGTTCCCGCAGATGAAGATGATTCCGGTGATGAAGATGATTCTGCTGATGGCAGCTCCAAGGAGGAAACCGAAGACGAAGATGCTGATAAAGGTGAAGATGAAGACAAGCCTAAGACAAAAACAGTGAAGGAAACAACTTACGAATGGGAACTTCTAAATGATGTGAAAGCTATATGGCTGAGGAATCCAAAGGAGGTTACCGAGGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGGATTTCAGTGATGAGAAACCTCTATCGTGGAGTCACTTCACTGCCGAAGGTGATGTAGAGTTCAAGGCAGTCCTGTTTGTACCACCTAAGGCACCTCAGGATTTATACGAGAGCTATTATAACGCAAACAAATCCAACCTGAAGTTGTATGTTAGACGAGTCTTCATTTCAGACGAGTTTGATGAACTGTTGCCCAAGTACCTAAACTTCTTGAGGGGTCTTGTTGATTCCGACACATTGCCACTCAATGTATCGCGAGAAATGCTTCAACAACATAATAGTCTAAAGACAATCAAGAAGAAACTTATCAGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAGGATCCTGACGAGTCCAGTGACAGAGAAAAGAAAGAAGATGCATCCTCTGACAACGATGAGAAGAAAGGTCAATATGTCAAGTTCTGGAATGAATTTGGTAAATCCATTAAACTTGGTATCATCGAGGATGCCACTAACAGAAATCGGTTGGCAAAATTGCTCAGATTTGAGAGCACCAAGTCTGATGGTAAATTGACATCCCTGGATCAGTACATTTCTAGAATGAAAGCTGGCCAGAAGGACATCTTTTACATAACTGGAACCAGCAAAGAACAGCTGGAGAAATCTCCATTCCTTGAACAGCTTAAGAAGAAAAATTTTGAGGTTATTTACTTCACGGATCCAGTTGATGAATACTTAATGCAATACCTGATGGATTATGAAGATAAAAAGTTCCAAAATGTGTCCAAGGAGGGTTTGAAACTCGGGAAGGATACGAAAAACAAGGAACTGAAGGAATCCTTTAAGGATCTTACGAAGTGGTGGAAAACTGCTCTATCCAAGGATAATGTCGATGATGTGAAGATATCCAACCGATTGGATAACACTCCTTGTGTAGTAGTGACATCAAAATATGGTTGGAGTGCAAACATGGAGCGAATCATGCAGTCTCAAACTTTGTCAGATGCTAGCAAGCAAGCATACATGCGTGGGAAGAGGGTGCTTGAGATCAATCCTAGGCATCCTATTATCAAGGAGCTCCGCGAGAGAGTAGTAAAGAACCCCGAGGATGAGGGCGTGAAACAAACAGCACAGCTGATGTACCAGACTGCACTCTTCGAAAGTGGCTTCAATCTTGATGATCCTAAGGATTTCACTTCCCGTATTTATGATTCGGTGAAGTCTAGTATGAACATCAGTCCTGATGCAACAGTTGAAGAGGAAGATGACACCGAGGCGGAGGCTGAAAGTGAGGTAAAAGAAACTCCAAACAAGCCTGAAGCTGAAGTTGATGATGATGTTGACGATGCGAAAGACGAGTTGTAG 2184 0.4185 MDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLDIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNEDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLKEEAGEYLEESKLKELVKRYSEFINFPIYIWASKEVDVEVPADEDDSGDEDDSADGSSKEETEDEDADKGEDEDKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTEEEYTKFYHSLAKDFSDEKPLSWSHFTAEGDVEFKAVLFVPPKAPQDLYESYYNANKSNLKLYVRRVFISDEFDELLPKYLNFLRGLVDSDTLPLNVSREMLQQHNSLKTIKKKLIRKALDMIRRIADEDPDESSDREKKEDASSDNDEKKGQYVKFWNEFGKSIKLGIIEDATNRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGTSKEQLEKSPFLEQLKKKNFEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKNKELKESFKDLTKWWKTALSKDNVDDVKISNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKNPEDEGVKQTAQLMYQTALFESGFNLDDPKDFTSRIYDSVKSSMNISPDATVEEEDDTEAEAESEVKETPNKPEAEVDDDVDDAKDEL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00914 727 FunFam Heat shock protein 90 1 214 - -
Vian7g00914 727 PIRSF HSP90_HTPG 1 724 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Vian7g00914 727 MobiDBLite consensus disorder prediction 204 234 - -
Vian7g00914 727 SUPERFAMILY Ribosomal protein S5 domain 2-like 258 537 IPR020568 -
Vian7g00914 727 FunFam Endoplasmin-like isoform B 544 690 - -
Vian7g00914 727 Gene3D - 450 537 - -
Vian7g00914 727 Hamap Chaperone protein HtpG [htpG]. 1 680 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Vian7g00914 727 SMART HKATPase_4 11 168 IPR003594 -
Vian7g00914 727 Pfam Hsp90 protein 170 708 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Vian7g00914 727 CDD HATPase_Hsp90-like 1 188 IPR020575 -
Vian7g00914 727 FunFam endoplasmin homolog 450 537 - -
Vian7g00914 727 SUPERFAMILY HSP90 C-terminal domain 556 678 IPR037196 -
Vian7g00914 727 Gene3D - 1 210 IPR036890 -
Vian7g00914 727 Gene3D - 544 690 IPR037196 -
Vian7g00914 727 MobiDBLite consensus disorder prediction 204 245 - -
Vian7g00914 727 MobiDBLite consensus disorder prediction 397 418 - -
Vian7g00914 727 MobiDBLite consensus disorder prediction 682 727 - -
Vian7g00914 727 Gene3D - 257 449 - -
Vian7g00914 727 FunFam endoplasmin homolog 257 449 - -
Vian7g00914 727 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1 198 IPR036890 -
Vian7g00914 727 ProSitePatterns Heat shock hsp90 proteins family signature. 9 18 IPR019805 GO:0005524|GO:0006457|GO:0051082
Vian7g00914 727 PRINTS 90kDa heat shock protein signature 156 173 IPR020575 -
Vian7g00914 727 PRINTS 90kDa heat shock protein signature 174 192 IPR020575 -
Vian7g00914 727 PRINTS 90kDa heat shock protein signature 61 78 IPR020575 -
Vian7g00914 727 PRINTS 90kDa heat shock protein signature 104 126 IPR020575 -
Vian7g00914 727 PRINTS 90kDa heat shock protein signature 79 96 IPR020575 -
Vian7g00914 727 PRINTS 90kDa heat shock protein signature 10 32 IPR020575 -
Vian7g00914 727 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 701 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Vian7g00914 727 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 12 167 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00914 Vian-Chr7 17415777 17419780 Dispersed