Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00903 ATGGCTCTCTTAACTTCCTTGCCTGAGCACTCCACCACCCCAAAACGCCATAAACGAAAACCACAGCAACAGCAACAACAGCAGAAACAGAAACAGAAGCAGAAAGCAGCTTCTTCATGGGATCAAATCAAGAACCTTTTAACCTGCAAACAGATGGAAGGATCGAGGGTTCATGACCCTTCAAAAGGGTACTCAAAGATAGGGTCTTCTTGCAGCTCCATATGCAGCTTCAGAGACGTTGTTCATGGGAACACACGTGTGGTGCATAGGTCTGATAACTCTTCGCCGGAGAGTAGCTCTCTGGGTCAGGAAACCGGTTTACTCACCAGGAAACCGGTGACCGCTTCTACCCGCTCCACAGCCGCAAAATCAAACGCTGGAACAACCTACACGTCGTCATCATCTTCCAGGGGAATGCAGTTCAGAAAGCTATCTGGCTGTTATGAATGTCACATGATCATTGACCCTAGCAGGTTACCAGTTGCAAGAAGCACTGTGTGTGCTTGCTCTCACTGTGGTGAGGTCTTCCCTAAAATGGAGAGTCTGGAGCTTCATCAAGCTGTTCGTCATGCCGTTTCGGAGCTGGGTCCGGAAGATTCGGGAAGGAACATAGTGGAAATAATATTCAAATCGAGCTGGTTGAAGAAGGATAATCCCATATGCAAGATCGAACGGATACTAAAAGTGCACAATACTCAACGCACCATCCAACGGTTCGAGGAGTGCAGGGACACGGTTAAGAACCGTGCGCTGGGCAGCACCAAGAAAAACCCCAGGTGCGCAGCCGACGGCAACGAACTCTTGCGGTTCCACTGCACCACCTTAACGTGCGCACTTGGCGCACGTGGGTCATCCTCGCTGTGCGCCTCCGTACCCGGCTGTGGTGTCTGTACAATCATCAGGCACGGTTTCCAAGGCGGCGGCGGCGAACACGCGAAGGGCAAGGGCGTGAGGACCACCGCAAGCAGCGGTAGGGCACACGACTCCGTCGTGTGCGGCGACGGCACGCGGAGGGCCATGCTGGTGTGCCGGGTGATTGCGGGGCGCGTGAAGCGCGTGGCGGAGGACACGCCGCCGTCGGAGGAGGAACACGTGTCGGTTGCTTCCTATGATTCTGTAGCCGGGTACGCTGGAATCTACTCGAATCTCGAGGAGTTGGTTGTTTTCAATCCAAAGGCTATTCTTCCTTGTTTCGTGGTTATTTACAAAGTGCCTTCGTGTTAA 1224 0.531 MALLTSLPEHSTTPKRHKRKPQQQQQQQKQKQKQKAASSWDQIKNLLTCKQMEGSRVHDPSKGYSKIGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETGLLTRKPVTASTRSTAAKSNAGTTYTSSSSSRGMQFRKLSGCYECHMIIDPSRLPVARSTVCACSHCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECRDTVKNRALGSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCGVCTIIRHGFQGGGGEHAKGKGVRTTASSGRAHDSVVCGDGTRRAMLVCRVIAGRVKRVAEDTPPSEEEHVSVASYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYKVPSC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00903 407 SUPERFAMILY ADP-ribosylation 192 403 - -
Vian7g00903 407 Gene3D - 191 404 - -
Vian7g00903 407 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 38 402 - -
Vian7g00903 407 MobiDBLite consensus disorder prediction 25 39 - -
Vian7g00903 407 ProSitePatterns Zinc finger C2H2 type domain signature. 167 190 IPR013087 -
Vian7g00903 407 MobiDBLite consensus disorder prediction 88 135 - -
Vian7g00903 407 MobiDBLite consensus disorder prediction 1 39 - -
Vian7g00903 407 ProSiteProfiles Zinc finger C2H2 type domain profile. 167 195 IPR013087 -
Vian7g00903 407 FunFam C2H2-like zinc finger protein 191 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00903 Vian-Chr7 17320897 17323654 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vian7g00903 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00903 7 17320897 17323654 Vian7g00903 7 17320897 17323654 ECH