Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00895 ATGGACCGACGCTGGCCATGGAAGAAAAAATCGTCGGACAAGGCTGTGATGGAGAAAGCAGCTGCAGAATTGGACTCTGCTGCGGATGCTGCCAATCAGAAGCCGAGCTACGTCCAAATATCAGTAGAGTCATATTCTCATCTGACTGGTTTGGAGGATCAAGTGAAGGCATATGAAGAAAAAGTTCAGACACTGGAGGATGATATCAACAAATTAAATGAAAAACTGTCTGCAGCTAATTCGGAGATAAATACAAAGGAAAGCCTGGTAAAACAGCATGCTAAAGTAGCAGAAGAGGCTGTCTCAGGCTGGGAAAAGGCTGAAGCAGAAGCTTTGGCTTTGAAGAACCATCTGGAGTCTGTCACTCTTGCAAAACTCACTGCTGAGGATCAGGCATCACAGTTAGATGGTGCGCTTAAAGAGTGTATGCGACAGATAAGAAACCTAAAGGAAGAACATGAACAGAAATTACAGGAAGTTGCTCTCACAAAAACCAAGCAATTGGACAAGATTAAGGGTGAGCTGGAGGCAAAGATAGCAAGCTTTGAACAGGAACTCCTCAGGTCTGCTTCCGACAATGCGGCTCTGTCAAGGTCCTTGCAAGAGCGTTCTAACATGATAATCAATTTAAGGGAAGAAAAAGCTCACGCTGAGGCTGAAATTGAGCTTCTTAAGGGCAACATTGAATCATGTGAAAGAGAAATCAATTCACTCAAATATGAGGTTCATGTTATTGCCAAAGAGCTTGAGATTCGCAATGAAGAAAAGAATATGAGCATGAGGTCTGCAGAAGCTGCTAACAAGCAGCACATGGAGGGTGTTAAAAAAATTGCTAAATTGGAAGCAGAGTGCCAAAGATTACGTGGTCTTGTGCGGAAGAAGTTACCTGGTCCAGCTGCACTTGCACAAATGAAGCTAGAAGTTGAAAGTCTTGGTCGAGAATACGGAGAAACTCGATTAAGGAAGTCTCCTGTCAAACCTCCTGGTTCTCACATGTCTCCTATGCCTGGGTTTTCCCTAGATAATGCTCAGAAATTCCACAAAGATAATGAATTTCTTACTGAGCGTTTGCTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAATAGTGAACTGCAGGCTTCAAGGAGTATGTTTGCGAAAACTTTGAGCAAACTTCAAAGTTTGGAAGCACAGGTTCAGACAAGTAATCAGCAGAAGGGATCTCCTAAATCCATCATAAATGAAAGCATTTACAGTCAAAATGCAAGCAATGCACCAAGCTTCATCTCCATGTCTGAAGATGGAAATGATGATGTGGGAAGTTGTGCCGAGTCTTGGTCTACAGCAATTCTCTCTGATCTTTCCCAATTCCCTAAAGGAAAGAATACTGAGGAATTGAGCATATCTGATACCACTAAGAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTGGCTCGATTATCAAATGACTGCGGTGAAGTTTCAGGTACTTCAAACAATATAGCAAACGAAGCTGTGACCGATGAAATATCAGAAGTCAGCACTGGGAAAGATGTTCCCTCTGACTCCCAAGAGAATAGTGATCCAAATCCACTGCCAAGTGAGGTGTCTTCTGCTGAGGAGTTATCAGCACCTGATCCCCAATCTGATGTTCCTAGCTTGTCGCTAGCAGAGCTTCAATCAAGAATATTATCAGTTTTCGAGTCCATGGCTAAGGATGCTGATATGGAGAAGATATTGAAGGATATTAAACACGTTCTTGAAGATGCATATGGCGTTTCAATCCAGGACTCTGTATCTGCCGTTCCCCATGATGTCACGCCTTCTGATATTACGTGTGATAAGCAGGGTAACGCTGAAGATGTTGCCTTAAATGCGGAGAAAAAAGTTATTTCATCCCAGCAACCTCCAGAGTATGTTCAGATAACTACGGATCTAGAAGCCGCAATGTCTCAAATTCATGACTTTGTATTGCTCCTCGCCAAAGAAGCAATGGCAGCGCATGATATATCTTCTGATGGAGATGGAATAAGCCAAAAGATGCAGGAGTTCTCTGTCACTTTTAACAAGGTTACCTCCAATGAAGAAAATTTGCCACAGTTTGTTCTGGACCTGTCTAGTGTTCTAGCCAAAGCAAGTGAATTCAGATTTAATATTCTCGGTTACAAGGGTACGGAAGCAGAAACCAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCAGAAAATAAGTTAGTTCAAGACGATTCATCTGGGGAGAGATATCAAAATGGTCACTCCCATATTCTTAATCCCTGTTCCGATCCTGAAATTCCTGATGATGGAAATTTGGCCTCAGGCTATGAATCAAATGCCACGCAGAAGTTCTCAATGGAGGAGTTTGAAGAATTGAGGTTAGAGAAAGAGAAGGCTATTGCGGATCTGTCAAAATGTGCTGAAAATCTTGAACAGACAAAGTCTCGGTTACTAGAGACAGAGCAACATCTAGCTGAAGTTAAATCACAGATGGCTTCTGCTCAAAGAGCAAATAGCTTAGCTGAGACACAGCTAAAATGTATGACAGAATCGTACAGGTCAATTGAAACACGTGCAAGGGAGTTTGAGACTGAGCTTATTCATCTGCGAATGAAGACAACAACTCTGGAGAATGAACTAGAAGATGAAAAGAAGGCTCATGAAGCAGCTTTGGCCAAACACAAGGAGCTAGAAGAACAACTACAAAGGATTGAGAGCTCAGCTGCTGATAATGACATAAAGGCTAAGCAGGAGAGAGACTTGACAGCCGCTGCTGAAAAGCTAGCCGAGTGTCAGGAAACCATATTTCTTCTTGGCAAGCAGTTAAAAGCTCTGCATCCTCAAACAGAGCCAATGGAATCTCCTTATTCAAAGGCTGAAAACTTCACGGAGCGTGAACCTAATAGCCCAAGTTTACAAGATCAAGCAGAGATGGACAGTGCTACTTCTACATTTGTGCAAAGATTGGATGGAGATTCCCCTTTACATTTTAGCAACAGTTTATATAGTCCATCAGATAACGAGACAATCTTTCCAGCCATATCTTCTGTACAGAATCCAAACCAAAGGCCTACCAAGTCATCCTCATCATCAGCTTCGTCCACTCCAACACCAGAAAAACACACCCGAGGTTTTAGTAGGTTCTTTTCTTCAAAAGGTAAAAACGGTCATTGA 3198 0.424 MDRRWPWKKKSSDKAVMEKAAAELDSAADAANQKPSYVQISVESYSHLTGLEDQVKAYEEKVQTLEDDINKLNEKLSAANSEINTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLAKLTAEDQASQLDGALKECMRQIRNLKEEHEQKLQEVALTKTKQLDKIKGELEAKIASFEQELLRSASDNAALSRSLQERSNMIINLREEKAHAEAEIELLKGNIESCEREINSLKYEVHVIAKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGREYGETRLRKSPVKPPGSHMSPMPGFSLDNAQKFHKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMFAKTLSKLQSLEAQVQTSNQQKGSPKSIINESIYSQNASNAPSFISMSEDGNDDVGSCAESWSTAILSDLSQFPKGKNTEELSISDTTKKLELMDDFLEVEKLARLSNDCGEVSGTSNNIANEAVTDEISEVSTGKDVPSDSQENSDPNPLPSEVSSAEELSAPDPQSDVPSLSLAELQSRILSVFESMAKDADMEKILKDIKHVLEDAYGVSIQDSVSAVPHDVTPSDITCDKQGNAEDVALNAEKKVISSQQPPEYVQITTDLEAAMSQIHDFVLLLAKEAMAAHDISSDGDGISQKMQEFSVTFNKVTSNEENLPQFVLDLSSVLAKASEFRFNILGYKGTEAETNSPDCIDKIALPENKLVQDDSSGERYQNGHSHILNPCSDPEIPDDGNLASGYESNATQKFSMEEFEELRLEKEKAIADLSKCAENLEQTKSRLLETEQHLAEVKSQMASAQRANSLAETQLKCMTESYRSIETRAREFETELIHLRMKTTTLENELEDEKKAHEAALAKHKELEEQLQRIESSAADNDIKAKQERDLTAAAEKLAECQETIFLLGKQLKALHPQTEPMESPYSKAENFTEREPNSPSLQDQAEMDSATSTFVQRLDGDSPLHFSNSLYSPSDNETIFPAISSVQNPNQRPTKSSSSSASSTPTPEKHTRGFSRFFSSKGKNGH 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00895 1065 Coils Coil 200 241 - -
Vian7g00895 1065 Coils Coil 246 283 - -
Vian7g00895 1065 MobiDBLite consensus disorder prediction 1005 1065 - -
Vian7g00895 1065 SUPERFAMILY Tropomyosin 796 967 - -
Vian7g00895 1065 MobiDBLite consensus disorder prediction 954 988 - -
Vian7g00895 1065 MobiDBLite consensus disorder prediction 969 988 - -
Vian7g00895 1065 Coils Coil 797 852 - -
Vian7g00895 1065 Pfam Filament-like plant protein, long coiled-coil 86 960 IPR008587 -
Vian7g00895 1065 MobiDBLite consensus disorder prediction 1005 1049 - -
Vian7g00895 1065 MobiDBLite consensus disorder prediction 495 556 - -
Vian7g00895 1065 Coils Coil 48 89 - -
Vian7g00895 1065 Coils Coil 881 942 - -
Vian7g00895 1065 Coils Coil 132 185 - -
Vian7g00895 1065 Coils Coil 343 370 - -
Vian7g00895 1065 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1060 - -
Vian7g00895 1065 Coils Coil 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00895 Vian-Chr7 17252007 17256344 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00895 7 17252007 17256344 Vian7g00895 7 17252007 17256344 ECH
Vian7g00895 7 17252007 17256344 Vian4g02380 4 40496452 40501240 PCT