Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00870 ATGGCTCGCTACTCCCTCTGCGCTCTCCTCCTCTTCGCCGCCGTGGCCGCCGCCGCTGGCGCCAACACCGACGCTGATGACATCCTGATCCGTCAGGTGGTGCCGGAGGGCGAGGTGGAGGACCACATGCTGAACGCGGAGCACCACTTCTCGAACTTCAAGGCGAAGTTCGGGAAAACCTACGCGACGAAGGAAGAACACGATCATCGCTTCGGGGTATTCAAGTCAAACCTGCGCAGGGCGAGGCTTCACGCGCAACTCGACCCCTCCGCCGTCCACGGCGTCACCAAATTCTCCGATCTCACTCCGGCGGAGTTCCATCGCCAGTTCCTCGGTCTCAAACCGCTCCGCTTGCCGTCAAACGCGCAGAAGGCCCCCATCCTCCCCACCAACAATCTCCCAAAAGATTTCGATTGGAGAGACAAAGGAGCCGTCACTAACGTCAAGGACCAAGGTGCGTGTGGATCGTGTTGGTCTTTCAGTACCACGGGGGCATTGGAAGGAGCTCACTTTTTGGCTACTGGTGAGCTTGTGAGTCTTAGTGAGCAACAGCTTGTGGATTGCGACCACGTGTGTGATCCAGAAGAATATGGAGCGTGTGACTCAGGCTGTAATGGTGGCTTGATGAACAACGCATTTGAGTACATACTTGGGGCTGGGGGAGTACAGAGAGAAAAGGACTATCCATACACTGGAAGAGATAGCTCCTGCAAATTTGATAAAAGCAAAATTGCAGCTTCTGTAGCTAATTACAGTGTGATTTCCCTTGATGAAGAACAAATTGCTGCAAATCTTGTGAAGAATGGCCCTCTTGCAGTTGCTATCAATGCAGTATATATGCAGACATACATTGGTGGTGTCTCTTGTCCATACATCTGTGGGAAGCATTTGGATCATGGGGTTCTTTTAGTGGGTTATGGTGAAGGTGCATATGCTCCCATTCGTTTTAAGGAAAAGCCTTACTGGATCATTAAGAATTCGTGGGGGGAGAGCTGGGGAGAGAATGGATACTACAAGATCTGCAGAGGTAAAAATGTATGTGGAGTAGATTCCATGGTCTCAACATATGTAATTCTGTATGCTTGTCAGTCCAGTGCCTATGTTCTTTGTTATGGCAACTTGGCAGAGTAA 1131 0.5084 MARYSLCALLLFAAVAAAAGANTDADDILIRQVVPEGEVEDHMLNAEHHFSNFKAKFGKTYATKEEHDHRFGVFKSNLRRARLHAQLDPSAVHGVTKFSDLTPAEFHRQFLGLKPLRLPSNAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGACGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILGAGGVQREKDYPYTGRDSSCKFDKSKIAASVANYSVISLDEEQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFKEKPYWIIKNSWGESWGENGYYKICRGKNVCGVDSMVSTYVILYACQSSAYVLCYGNLAE 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00870 376 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Vian7g00870 376 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 45 350 IPR013128 GO:0008234
Vian7g00870 376 FunFam Cysteine protease RD19A 28 357 - -
Vian7g00870 376 SMART Inhibitor_I29_2 50 106 IPR013201 -
Vian7g00870 376 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 321 340 IPR025661 -
Vian7g00870 376 Gene3D Cysteine proteinases 19 358 - -
Vian7g00870 376 SMART pept_c1 133 358 IPR000668 GO:0006508|GO:0008234
Vian7g00870 376 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 151 162 IPR000169 -
Vian7g00870 376 Pfam Papain family cysteine protease 133 355 IPR000668 GO:0006508|GO:0008234
Vian7g00870 376 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Vian7g00870 376 PRINTS Papain cysteine protease (C1) family signature 321 327 IPR000668 GO:0006508|GO:0008234
Vian7g00870 376 PRINTS Papain cysteine protease (C1) family signature 151 166 IPR000668 GO:0006508|GO:0008234
Vian7g00870 376 CDD Peptidase_C1A 134 354 IPR039417 -
Vian7g00870 376 Pfam Cathepsin propeptide inhibitor domain (I29) 50 106 IPR013201 -
Vian7g00870 376 SUPERFAMILY Cysteine proteinases 47 357 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00870 Vian-Chr7 17001148 17003689 Wgd