Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00850 ATGTCAGGGCCGCTTGATCGGTTCGCACGTCCCTGCTTTGAGGGGTTTTCTGGTCATGATGAAAGGAGGGAGAGAAGATCGGATTTAGAGAATTCAGAGGATGATCGGCGAACGAGGATTGGCAGTTTGAAAAAGAAAGCAATCAATGCTTCAAGCAAGTTCAGGCATTCTCTTAGGAAGAAGAGCAGCAGAAGGAAGAGCGCGAGCCGAAGCAATTCGGTCTCCATTGAGGATGTTCGAGATGTTAAGGAACTTCAGGCAGTGGATGCTTTTCGACAGGCACTTATGTCGGAAAGCTTGTTGCCGTCAAGACATGATGACTATCATATGTTACTAAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAGCAAAGCACATGTGGGCCAACATGATCCAATGGAGGAAAGAGTATGGTACTGATACGATTATGGAGGATTTTGAATTCAGTGAGTTGAATGAAGTCCTGCAGTACTATCCACATGGTTATCATGGGGTGGATAAGGATGGAAGACCTGTTTATATTGAAAGGTTAGGCAAAGTTGATCCCTGTAAGCTTATGCAAGTGACTACCATAGAAAGGTATTTGAGATACCATGTGCAGGGTTTTGAGCAAACGTTTGCTGTTAAGTTTCCTGCATGCTCTATTGCTGCAAAGAGACATATAGATTCAAGTACAACCATTTTGGACGTTCATGGTGTGGGTTTTAAAAACCTAACCAAATCTGCTCGGGAACTCATCATGCGGCTGCAGAAAATTGATGGTGATTACTATCCCGAAACATTATGTCAAATGTATATAATCAATGCTGGTCCTGGTTTTAAGCTGCTTTGGAACACAGTGAAATCATTTCTTGATCCCAAAACTACTTCAAAGATAAATGTTCTTGGAAACAAGTTCCAGAACAAATTACTTGAAATTATTGACGCGAGTGAGCTGCCAGAATTTCTAGGTGGTAGTTGTACTTGTATAGAACAAGGTGGTTGTATGAGGTCTGATAAGGGTCCATGGCAGGATCCAAATATTTTAAAGATGGTTCTCAGTGGCGAAGTGCAATGTTCAAGGCAAATAGTAACGGTTTCTAACGATGAGGGCACCATTATCGAATGTGACAAGGCATTTCCAATGCCAATTAGAAGTAGTGATACATCAACAGCAGAATCAGGATCTGAAGTTGAAGATATCACTTCTCCCAAAGCCAGTGGAAATTATACAAACCCCAGATTAACTCCTGTTCATGAAGAAGCAAGGCTGATTGGTAAGGCTAATCTCTCTGGCGGTTTCTCTGAGTATGATGAGTTTATTCCCATGGTTGACAAGGCCGTTGACCTCGGATGGAAGGAGAAACAAGTAACAACTCAAAACTCGAAAAGTTCAACAGAAAATTTCCTGCTGAGGACTGGAAAATCTGGTGGAAAGTGTGCACATATCTGGATTGTTATTGTGGGCTTCTTTGTTGGCATCTTTGCTCTTGCTCGTTCACTAGCATTTCATGTGACTAAGAGAATAAAGGACACTAAATTTGATTCTACCAAAAATACACCTAACATGACCATTGACTCAATAGCCAAGGAAGAATCTCGGCCCCCATCACCTGTTCCTAGATTAACAAAGACAGAACTTGTCTCATCTGCTTTGAAACGCCTTGGTGAGCTCGAGGAGAAGGTTGACATGCTACAGTCAAAACCAAATGTGATGCCATATGAGAAAGAGGAGCTGCTGAATGCTGCTGTTTATCGTGTGGATGCATTGGAAGCAGAACTCATTGCTACAAAGAAGGCTTTATACGAAGCTTTGATCAGACAAGAAGAACTTCTGGCCTATATAGATCGTCAGGAAAGAAGTAAATTCGCGAAAAAGAAGTTTTGCTGGTGA 1878 0.4175 MSGPLDRFARPCFEGFSGHDERRERRSDLENSEDDRRTRIGSLKKKAINASSKFRHSLRKKSSRRKSASRSNSVSIEDVRDVKELQAVDAFRQALMSESLLPSRHDDYHMLLRFLKARKFDIEKAKHMWANMIQWRKEYGTDTIMEDFEFSELNEVLQYYPHGYHGVDKDGRPVYIERLGKVDPCKLMQVTTIERYLRYHVQGFEQTFAVKFPACSIAAKRHIDSSTTILDVHGVGFKNLTKSARELIMRLQKIDGDYYPETLCQMYIINAGPGFKLLWNTVKSFLDPKTTSKINVLGNKFQNKLLEIIDASELPEFLGGSCTCIEQGGCMRSDKGPWQDPNILKMVLSGEVQCSRQIVTVSNDEGTIIECDKAFPMPIRSSDTSTAESGSEVEDITSPKASGNYTNPRLTPVHEEARLIGKANLSGGFSEYDEFIPMVDKAVDLGWKEKQVTTQNSKSSTENFLLRTGKSGGKCAHIWIVIVGFFVGIFALARSLAFHVTKRIKDTKFDSTKNTPNMTIDSIAKEESRPPSPVPRLTKTELVSSALKRLGELEEKVDMLQSKPNVMPYEKEELLNAAVYRVDALEAELIATKKALYEALIRQEELLAYIDRQERSKFAKKKFCW 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00850 625 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Vian7g00850 625 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Vian7g00850 625 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Vian7g00850 625 MobiDBLite consensus disorder prediction 49 67 - -
Vian7g00850 625 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Vian7g00850 625 MobiDBLite consensus disorder prediction 515 536 - -
Vian7g00850 625 Pfam CRAL/TRIO, N-terminal domain 104 131 IPR011074 -
Vian7g00850 625 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 24 613 - -
Vian7g00850 625 Gene3D - 140 350 IPR036865 -
Vian7g00850 625 Gene3D - 60 139 - -
Vian7g00850 625 MobiDBLite consensus disorder prediction 1 75 - -
Vian7g00850 625 CDD SEC14 153 320 IPR001251 -
Vian7g00850 625 FunFam SEC14 cytosolic factor 140 352 - -
Vian7g00850 625 SUPERFAMILY CRAL/TRIO N-terminal domain 83 148 IPR036273 -
Vian7g00850 625 Coils Coil 543 563 - -
Vian7g00850 625 MobiDBLite consensus disorder prediction 13 42 - -
Vian7g00850 625 MobiDBLite consensus disorder prediction 379 408 - -
Vian7g00850 625 SMART sec14_4 152 323 IPR001251 -
Vian7g00850 625 Pfam CRAL/TRIO domain 158 320 IPR001251 -
Vian7g00850 625 SUPERFAMILY CRAL/TRIO domain 152 346 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00850 Vian-Chr7 16735694 16739909 Dispersed/Wgd