Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00833 ATGTTCAGAAATCAGTACGACACGGACGTGACTACATGGAGCCCGGCGGGGCGACTGTTCCAAGTGGAGTACGCGATGGAGGCGGTGAAGCAGGGCTCGGCGGCGATCGGTCTCCGATCCAAGACGCACGTGGTTCTCGCATGCGTCAACAAGGCCAACTCCGAACTCTCCTCGCACCAGAAGAAGATCTTCAAGGTCGACAACCACATCGGCGTCGCCATCGCCGGCCTCACTGCCGACGGCCGCGTCCTATCCCGATACATGCGATCCGAGTGCATCAACTATAACTACACCTACGAGTCTCCTCTTCCTGTAGGCAGACTTGTTGTTCAACTCGCCGACAAGGCACAGGTTAGATCCTTCCCTATGTATAGCTCAGGGTACTCTCGGTTTAACACCCAGAGCTCAGCCCCGACAGGTTGTGAATCTAACCCACATAATGTCGTACCCGAGCACACCGAGGTTTGCACGCAGCGATCATGGAAACGTCCTTATGGGGTTGGCCTCCTGGTAGCTGGATTAGATGAATCAGGAGCTCACCTCTATTACAACTGTCCCAGTGGAAACTATTTTGAATATCAGGCTTTTGCTATTGGATCTCGCTCTCAAGCTGCAAAGACATATTTGGAACGCAGGTTTGATAACTTCATGGGCTCTTCTCGAGAAGATCTGATCAAAGATGCACTTATCGCAACTAGGGAGTCCTTGCAAGGTGAAAAACTGAGGAGTTCTGTATGCACTATTGCTGTGGTTGGAGTTGGTGAACCATTCCACATTTTAGATCAAGAAACTGTTCAACAGCTGATTGATACTTTTGAGATTGTGAAGGAGGATGAACCTCCAGCTGAAGAAGCTCAGCCAGCAACCGAGCAGGATGCTCCCACCGACCAGGCATCTGGTGCAGATCAAGGTGCTGCTGGAGACCAAGGTGGTTCTCCAATGGAAATTTGA 951 0.5131 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDNHIGVAIAGLTADGRVLSRYMRSECINYNYTYESPLPVGRLVVQLADKAQVRSFPMYSSGYSRFNTQSSAPTGCESNPHNVVPEHTEVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFMGSSREDLIKDALIATRESLQGEKLRSSVCTIAVVGVGEPFHILDQETVQQLIDTFEIVKEDEPPAEEAQPATEQDAPTDQASGADQGAAGDQGGSPMEI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00833 316 ProSiteProfiles Proteasome alpha-type subunit profile. 21 269 IPR023332 -
Vian7g00833 316 Pfam Proteasome subunit 152 251 IPR001353 GO:0005839|GO:0051603
Vian7g00833 316 Pfam Proteasome subunit 29 119 IPR001353 GO:0005839|GO:0051603
Vian7g00833 316 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Vian7g00833 316 MobiDBLite consensus disorder prediction 276 316 - -
Vian7g00833 316 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Vian7g00833 316 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 279 IPR029055 -
Vian7g00833 316 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 10 275 - -
Vian7g00833 316 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Vian7g00833 316 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 269 IPR029055 -
Vian7g00833 316 CDD proteasome_alpha_type_1 6 252 IPR035144 GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00833 Vian-Chr7 16603316 16605964 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00833 7 16603316 16605964 Vian7g00833 7 16603316 16605964 ECH