Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00826 ATGAGTTGGAGAACTATAGCTTCCACTTCAAGACACACGTTCAAGAGACTCAATTCCATCTTCCGATCCCATTGCGCCACCTTCCCTTCTCCGCAGCACTCACGCGCCTCCTTTGCCGCCTTCCTCCACGCGCCGTTCACCACCACCACCCTTCACTCCTCCCAACCCACCAACGCCCTCATCGACCCCAAAGTCCATGTGACGCAAAACGACGCCGTCGACGACAACGAAGACGCAACGAACGAGTTTCTATCGCGATTTGTGTGGATAATGCGGAAGAAGGTGAAGGAAGCGTACCCGGAATCCGACAAGGCCACCGTGGATGGCATGCTCGTGGGGATCGTGGAGAGGGTTACGGCGGAGATGGAAAAGGGCAGGGGAGTTGAAACGGCATCGTTGGGTTCGGGGGATTTCAGCGAGGATTTGTGGGGAACGGTGTGGGAGGTGAGCAATATGGTGTTGGCGGATATGGACAAGGAGAGGAAGAAGGAGAAAATGAAGGGCTTCTTGCAGTGCGAAGAGGTTAAGGAAATGTGCAGATTCGCCGGTGAAGTTGGCATTCGCGGCGATTTGCTTAGGGAGCTTAGGTTCAAGTGGGCGCGTGAGAAGATGGAGGAGCATGAGTTCTACGAGGGTTTGGAGAAAATGAGGAAGGAGGCACAGACTGAGGGGAAGGAAAGTGGTGTTGGTGAGGAGGGGAAGAAGGAGAATGTTGCTGTTGGACTTCCCAAGAGGAGAGGGAAGATAAGGTACAAGATTTATGGGCTTGATCTCTCTGATCCCAAGTGGGCACAAGTGGCTGATAGGATCCATGAGGCAGAGCAGGTGTTTTGGCCGCAGGAGCCGAAGGCAATTATAGGGAAAGCCAAGATGGTTAGGTCGAAGATTCTGTCGTGGAAGGATGATGATGATGATGGTTTGCAAAGCCTGTTGAATGAGTGGGCGGAACTTGTTCAACCTAGCAGGGTGGAATGGATAGATTTACTTGACAACCTGAAAGAGCAGAATCGTAGTCTGTACTCAAAGGTGGCTGAAATGTTATTGGCTGAAGATTCTTTCCAAACAATTGTCTCTGACTACTCTAGGCTTATTGATATCTATGCTAAAGAGGACTGCTTTGATGATGTTGAGAGATTGCTGAAGAAGATGAGCGAAAATGGTATACAACTAGATGCTGCAACGGCCAGTGTGTTGGTCCACATGTACTGCAAGGTAGGCAATCATGACCGTGCAAACGAAGCATTTGAAACCTTGAAGGGACTGGGTTTCAAACCGGACTTCCAAGTCTTCAATTCAATGATCATGGCATATGTGAATAATGGCCAGCCTAATTTGGGTGAGAAATTGATGAGGGAGATGGATTCAGGAAATATTAAACCCACGGAGGAAATATACATGGCGTTGCTCCGATCTTTTTCTCAACAAGGTGATACTAAAGGAGCTGACCGAATTTCATTAGCTATGCAGTTTGCAGGATTCCAGCAGAGTATGGAGGCATACACCCTACTTATTGAGGCAAATGCACACATTGGTGACCCTTATCAGGCAAAAAGCCATTTTAACTACATGATAAAACTTGGGCATAAGCCTGATGATCGCTGTGCTGCTAGCATGATTGCAGCTTATGAGAAGAAAAACTACTTGGACGATGCATTGGAGCTTCTTGTGCAGTTAGAGAGCGATGGGTTTGAGCCTGGGGTAGCCACTTATTCTGTTCTTGTGGACTGGTTGGGTAAGTTGCAGCTTGTTGATGAAGTTGAGCAGATTTTAGGAAAAATAGCTTTGCTGGGTGAGGCTCCTCCTTTTAAGCTTCAAGTAAGTCTCTGTGATATGTATGCAAGGGTTCGAAATGAGAAGAAGGCCCTTCAAATTCTAGGTGTACTGGAATCTAGGAAGGATGAATTAGGAAAAGCTGATTTTGAGAGAATTATAAGTGGCCTTATTGATGGTGGGTTTCGGCAAGATGCCCAACGAATATGTGGGATCATGGAGGCGCAGGGTTTCGATGCATCAAAGGTTAAGGTCAACCTTTTGAAGCCTGTCTCTAGAGGACCTCGTATGAGATAG 2067 0.4775 MSWRTIASTSRHTFKRLNSIFRSHCATFPSPQHSRASFAAFLHAPFTTTTLHSSQPTNALIDPKVHVTQNDAVDDNEDATNEFLSRFVWIMRKKVKEAYPESDKATVDGMLVGIVERVTAEMEKGRGVETASLGSGDFSEDLWGTVWEVSNMVLADMDKERKKEKMKGFLQCEEVKEMCRFAGEVGIRGDLLRELRFKWAREKMEEHEFYEGLEKMRKEAQTEGKESGVGEEGKKENVAVGLPKRRGKIRYKIYGLDLSDPKWAQVADRIHEAEQVFWPQEPKAIIGKAKMVRSKILSWKDDDDDGLQSLLNEWAELVQPSRVEWIDLLDNLKEQNRSLYSKVAEMLLAEDSFQTIVSDYSRLIDIYAKEDCFDDVERLLKKMSENGIQLDAATASVLVHMYCKVGNHDRANEAFETLKGLGFKPDFQVFNSMIMAYVNNGQPNLGEKLMREMDSGNIKPTEEIYMALLRSFSQQGDTKGADRISLAMQFAGFQQSMEAYTLLIEANAHIGDPYQAKSHFNYMIKLGHKPDDRCAASMIAAYEKKNYLDDALELLVQLESDGFEPGVATYSVLVDWLGKLQLVDEVEQILGKIALLGEAPPFKLQVSLCDMYARVRNEKKALQILGVLESRKDELGKADFERIISGLIDGGFRQDAQRICGIMEAQGFDASKVKVNLLKPVSRGPRMR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00826 688 Pfam Pentatricopeptide repeat domain 378 440 IPR002885 -
Vian7g00826 688 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 391 425 IPR002885 -
Vian7g00826 688 Pfam PPR repeat 499 527 IPR002885 -
Vian7g00826 688 Pfam PPR repeat 537 563 IPR002885 -
Vian7g00826 688 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 531 565 IPR002885 -
Vian7g00826 688 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 426 460 IPR002885 -
Vian7g00826 688 Coils Coil 329 349 - -
Vian7g00826 688 NCBIfam pentatricopeptide repeat 360 392 IPR002885 -
Vian7g00826 688 NCBIfam pentatricopeptide repeat 429 462 IPR002885 -
Vian7g00826 688 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 356 390 IPR002885 -
Vian7g00826 688 PANTHER OS07G0661900 PROTEIN 90 674 - -
Vian7g00826 688 Gene3D Tetratricopeptide repeat domain 333 487 IPR011990 GO:0005515
Vian7g00826 688 Gene3D Tetratricopeptide repeat domain 488 684 IPR011990 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00826 7 16550033 16552294 Vian7g00826 7 16550033 16552294 ECH