Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00822 ATGACCACCGGAGGAGGAGGAGGAGCAGGCGCCGGCGACTCCGCAGTGGGAGTTCGGATCCAGCAGCAGAGCCGAATGGCGCTCCCAGATTTCCTTCAGAGCGTGAATCTCAAGTACGTGAAATTAGGTTACCACTACTTGATCTCCAACCTCTTAACCCTATTTCTAGTTCCTTTGATCCTCATCACGCTAATCCAGGTCTCCCAGACCACCGACCTCCACCACCTCTGGCTCCACCTCCAGTACAACCTCCTCACCATCCTTACCTGCTCCGGCGTCCTCGTCTTCGGCCTCACGCTTTACGCCGTCACGCGCCCACGCGCTGTCTACCTTGTAGACTCTGCCTGCTTCCGCCCCGCCGACCACCTCAAAGCGCCCTTCCGGAGTTTCATGGACCACTCCCGCCTCACGGGAGACTTCGAGGAGTCGTCCCTGGATTTCCAGCGCAAGATCCTGGAACGCTCTGGGCTCGGGGAGGAGACCTACGTCCCCGAGGCCATGCACTCTATTCCGCCGCAGCCGTCGATGGCTGCGGCCAGAGCGGAGGCGGAACAAGTCATGTTTGGTGCCTTGGATAATCTCTTCCAAAACACCAGCCTTAAGCCTAAGGATATTGGTATTCTTATTGTGAATTGTAGCTTGTTTAACCCTACGCCCTCGCTCTCGGCGATGATTGTTAATAAGTACAAATTGAGAGGGAACATTAGGAGCTTTAATTTGGGAGGGATGGGGTGCAGTGCTGGGGTTATTGCGGTTGATCTTGCAAAGGACCTTTTGCAGATTCATAGGAACACTTATGCCGTGGTTGTTAGCACTGAGAACATTACTCAGAATTGGTACTTTGGGAACAAGAAGTCCATGCTCATCCCCAATTGCCTCTTCCGGGTGGGCTGCTCCGCACTGCTGCTGTCGAACAAGCTGGCCGATCGGAGGCGGGCGAAGTACCGGCTTGTCCATGTTGTGAGAACTCATCGCGGTGCCGATGACAAGGCGTTCCGGTGTGTTTACCAGGAGCAGGATGATGCTGGCAAGACTGGAGTTTCTTTGTCAAAGGATTTGATGGCAATTGCTGGTGGAGCATTGAAAACCAACATCACCACACTCGGTCCTTTGGTGCTACCAATTAGTGAGCAGCTTCTGTTTTTTGTGACTTTGCTGATGAAGAAGTTATTCAAGGCTGATGTGAAGCCTTACATACCGGATTTCAAGCTTGCTTTTGATCACTTTTGCATACATGCTGGAGGCAGGGCTGTGATTGATGAGCTGGAGAAGAACCTGCAGCTGCGTCCTGAGCATGTGGAGGCTTCTAGGATGACCCTGCACCGATTTGGGAACACTTCCTCTAGCTCCATTTGGTATGAGTTGGCTTACATTGAAGCCAAAGGGAGGGTGAGGAAGGGCAACAGGGTTTGGCAAATTGCATTTGGAAGTGGTTTCAAATGTAACAGTGCTGTTTGGCAGGCACTGAGAAATATTAAGCCTTCTCCTAATGGACCATGGGAAGATTGCATCGATAAGTATCCTGTGGAAATTGTCACATAG 1542 0.5201 MTTGGGGGAGAGDSAVGVRIQQQSRMALPDFLQSVNLKYVKLGYHYLISNLLTLFLVPLILITLIQVSQTTDLHHLWLHLQYNLLTILTCSGVLVFGLTLYAVTRPRAVYLVDSACFRPADHLKAPFRSFMDHSRLTGDFEESSLDFQRKILERSGLGEETYVPEAMHSIPPQPSMAAARAEAEQVMFGALDNLFQNTSLKPKDIGILIVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDLLQIHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSALLLSNKLADRRRAKYRLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFVTLLMKKLFKADVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLRPEHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRVRKGNRVWQIAFGSGFKCNSAVWQALRNIKPSPNGPWEDCIDKYPVEIVT 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00822 513 CDD CHS_like 93 486 - -
Vian7g00822 513 SUPERFAMILY Thiolase-like 318 487 IPR016039 GO:0016746
Vian7g00822 513 Gene3D - 129 488 IPR016039 GO:0016746
Vian7g00822 513 SUPERFAMILY Thiolase-like 95 312 IPR016039 GO:0016746
Vian7g00822 513 PIRSF Very_long_ch_3-ktacl-CoA_syn 30 513 IPR012392 GO:0006633|GO:0016020|GO:0016747
Vian7g00822 513 FunFam 3-ketoacyl-CoA synthase 119 488 - -
Vian7g00822 513 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 406 487 IPR013747 -
Vian7g00822 513 PANTHER 3-KETOACYL-COA SYNTHASE 78 510 IPR012392 GO:0006633|GO:0016020|GO:0016747
Vian7g00822 513 Pfam FAE1/Type III polyketide synthase-like protein 101 390 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00822 Vian-Chr7 16527678 16529219 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00822 7 16527678 16529219 Vian7g00822 7 16527678 16529219 ECH