Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00812 ATGGCAACTTTTCTTCGGTTTCTTCCTTTCTTTCTTATATTTAAACTTGCAAGTTCTGAATCGTTCATCGGCGTGAACTATGGGCAAGTCGCCGACAACCTGCCGCCGCCTTCGGCGACGGCGAAGCTCCTCCAATCGACGGCGATAGGGAAAGTCCGGTTGTACGGAACCGACCCGGCGATAATAAAAGCGCTGGCGAACACGGGAATTGGAATCGTGATCGGCGCGGCGAACGGCGACATTCCGGGCCTGGCGTCGGACCCGAACTTCGCGAAAACGTGGGTGAACACCAACGTCGTGCCGTACTACCCCGCGAGCAACATCATCCTGGTGACCGTTGGCAACGAAGTGATAACCTCGAACGACGAGGGCCTCGTGAACCAGATGCTGCCGGCGATCCAGAACGTGCAGAGCGCGCTGGACGCGGCCTCTCTAGGCGGCAAGATCAAGGTGTCGACGGTGCACTCGATGGCGGTTCTGAGGGACTCGGAGCCTCCCTCCGCCGGAAGGTTCCACCCTGAGTACGACACCGTTTTGCAGGGGCTGTTGTCGTTTAACAATGCCACGGGCTCACCCTTCGCCATCAACCCTTATCCCTACTTCGCCTACAGAAGCGACCCTGGCAGAGCCGATAACCTTGCTTTCTGCCTCTTTCAGCCTAACGCGGGCCGAATTGACTCTAACACCAACATCAAGTACATGAACATGTTCGATGCTCAGGTGGATGCGGTTCGCTCAGCGTTGGATTCTTTGGGGTTTAAGAATGTTGAGATTGTGGTTGCGGAGACAGGATGGCCCTACAAGGGAGACAGCAATGAAGCTGGTCCAAGTCTAGAGAATGCTAAGGCTTATAACGGTAATCTCATTGCACACCTTCGATCTATGGTTGGGACCCCATTGATGCCTGGAAAATCAGTGGACACGTACCTGTTTGCTCTGTATGATGAAGACTTGAAGCCCGGTGCTGCTTCTGAGAGAGCATTTGGACTTTTCAACCCTGATCAAACCATGATCTATGATGCTGGCCTCTCCAAACAGCAACAAACCAGTAGCCCCGTGCCAGTAGTTGCTCCGACCACTCCGGATGTGTCAAAATCTCCCGTGACTCCAAATCCAACAACAGTTCCAAGTCCAACCAAAACAAACTGGTGTGTGCCGAAAGCAGGAGTGTCAGATCCACAGTTGCAAGCAAATTTGGACTATGCTTGTGGGCAGGGGATTGATTGTGCTGCAATTCAACAAGGAGGAGCTTGTTTTGAACCTAACACTTTACTAAACCATGCTGCATATGCCATGAATCTATTGTATCAAGCTGCTGGACGGAATCCATTGACTTGTGATTTCTCCCAAACAGCCATGTTATCAACAAATAATCCAAGTTACAAGAGTTGTCTTTATGGTGGTGGAAATGCCTAA 1416 0.5169 MATFLRFLPFFLIFKLASSESFIGVNYGQVADNLPPPSATAKLLQSTAIGKVRLYGTDPAIIKALANTGIGIVIGAANGDIPGLASDPNFAKTWVNTNVVPYYPASNIILVTVGNEVITSNDEGLVNQMLPAIQNVQSALDAASLGGKIKVSTVHSMAVLRDSEPPSAGRFHPEYDTVLQGLLSFNNATGSPFAINPYPYFAYRSDPGRADNLAFCLFQPNAGRIDSNTNIKYMNMFDAQVDAVRSALDSLGFKNVEIVVAETGWPYKGDSNEAGPSLENAKAYNGNLIAHLRSMVGTPLMPGKSVDTYLFALYDEDLKPGAASERAFGLFNPDQTMIYDAGLSKQQQTSSPVPVVAPTTPDVSKSPVTPNPTTVPSPTKTNWCVPKAGVSDPQLQANLDYACGQGIDCAAIQQGGACFEPNTLLNHAAYAMNLLYQAAGRNPLTCDFSQTAMLSTNNPSYKSCLYGGGNA 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00812 471 FunFam Glucan endo-1,3-beta-glucosidase 14 21 349 - -
Vian7g00812 471 FunFam glucan endo-1,3-beta-glucosidase 7 378 467 - -
Vian7g00812 471 Gene3D Glycosidases 22 351 - -
Vian7g00812 471 Gene3D - 378 466 - -
Vian7g00812 471 SMART X8_cls 382 466 IPR012946 -
Vian7g00812 471 SUPERFAMILY (Trans)glycosidases 23 341 IPR017853 -
Vian7g00812 471 Pfam X8 domain 383 453 IPR012946 -
Vian7g00812 471 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 454 IPR044965 GO:0004553|GO:0005975
Vian7g00812 471 MobiDBLite consensus disorder prediction 349 377 - -
Vian7g00812 471 Pfam Glycosyl hydrolases family 17 23 340 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00812 Vian-Chr7 16429575 16431822 Dispersed/Wgd