Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00805 ATGGCTGAACAACGCGCCACCTCCGACAATCGCCACCAGCTCTCCGTCGCACCGCCATTGCAGATCTCCAAAGATGCCCAAGGATCTGACAATTCCATTCCACTCTCACCACAGTGGCTTCTGCCAAAGCCAGGGGAGAATAAACTTGGAACAGGATCTGTGGAGAACCACGTGGTCTCAAACCCACCTTATGGCCATCGCTCAGAGACTGTCAAGACATCTGGAAACGGAGAGGATGTGCATGATGACCATAAGAAAAAGGATGTCTTTAGGCCATCCATGTTTGACTCAGAAAGTGGACGTCGCGATCGCTGGCGTGATGAGGAGAGAGACACCAAGTCCTCCATTCGGAAGGATCGTTGGAGAGATGGGGACAAAGACCTAGGTGATTCTCGCAGAGTGGATCGATGGACAGATAATATGTCTGCAAGGAACTTTGCAGAAGCACGGCGTGGTGCATCTGATAATCACAGATGGAATGATTCAGGAAACAGAGAAACTAACTTTGACCAGCGGCGTGAAAGTAAGTGGAACACCCGCTGGGGTCCTGATGACAAGGAGCCAGAAGGCATCCGTGAAAAATGGAGCGACTCTGGAAAGGATGGTGATATACATTTGGAAAAAGGTAACATTTCCAGTCAGGGAAAGGATGAGAAGGAGGGAGAACACTATCGGCCATGGAGACCTAACTACTCACAAGGCCGTGCAAGGGTAGATCCTTCCCATACAACCCCAAACAAACCAGTCTCTACATTTTCCTATGGGCGTGGTCGTGGGGAGAATACACCCCCAGTTTCTAGTATTGGACATGGACGTACTGGTTCTCTTGCTAGCTCTTTGAGTAGCACATACTCTGGAACTGCATTGGAAAAGGTTCAAAGTGGACTTGAAGAATTGAACCCCTTTAGATATAACAGGACAAAATTGCTTGATGTGTACAGAGTGACTGGTATGGGTACAAATAGAAAACTAGTTGATGATTTTGTGCAGGTACCTAATCTTACTCAGGATGAACCCTTGGAGCCTCTAGCTATTCTGGCACCAAATCCTGAGGAAGTGGTTGTCTTGAATGGAATTGACAAAGGGGAGATAATTAGCAGCACTGCTCCTCAGGTTCCAAAAGATGGAAGGTCAACAGATTTTACTCACACAAGAAGAATGAAGCCTGGAAGTGCACCTTTCCAAGATAGAGGTGAAGATGGAGGTTCTTACAAAGTGCCTGAAGAGGTTTCCAGTAATAAAGATTCATCATTTGAAGGAAATACTTCTGTTCATCCTGGTGCTTCATGGCGAACAATGCCACTTGGTGATCATGCTGCCCAGTTTCACGATGGTAGAGATGTAACTAATGATGTTAGATTGAGAAAAACAGATCTGAACTCACTCCAGCCAAAAGATCCTCATAATCAGTGGGAAAATAATTTGGGTTATTTATCTGACTCCAAAGAAGTAGGTAAGTGGCAAGCTAGTGAAGATCCTGTTATTAAGAGGCAGTTGTCTGGCATTTTGGATAGTGAACTTGAAATCAGAAGAGTTCAACAGACTGCTCCAGAGGAGTTATCCCTTTTGTATAAAGATCCTAAGGGTCTAATCCAAGGTCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGGTATTTTGGTATCGATTTACCTGTTCGTCTGGAAAATTCAGCAGCTGACTCACCGTGGTTGTCTCTTGGTGATGCCATGCCCCATTTACGAGCTAAAGCTAGACCTCCACCTGGGTTTTCTACACCAAAGCCAAATGACTTCACAGATATTCCTGGCAGACAAATTTCCAGTACATTTGGGAATACTCTTACTGGTTTGAATGAGCTTGACATTTTGCGAAGTGATTCTAGGCATCGTCCAAGTCCTGATACCGAAGCTGAAAATAGGTTTCTGGAGTCACTCATGTCTGGTAGCAAGAATAGTCCTCCCCTTGATGGCCTGGCATTGTCAGAAGGTTTACAAGGGTTTGTTGGAAATAATCCTGGTAATATGGGTCCATCAGCAGTTGATAATGGAAATCTTTACTTGCTTGCTAAGAGGATGGCACTGGAACGACAACGGTCCTTGCCTAGTCCCTACCCTTACTGGCCAGGGCGTGATGCAGCTTCGTTTGCTCCAAAGCCGGAGGTTGTCCCAGATGCCTCCTTGCATTCTAAACTATTGTCTTCAGTGAGTGATAACTCTCGGCAACCTCAATCCCAAAATTCCGAGTTAATGTCAATCATCCAAGGTTTATCTGATAGGACATCTGCAGGCCTAAATAATGGTGGTGCTGGCTGGCCTAATTATCCTTTACAAGGTGCATTGGATCCCTTACAGAATAAAATTGACATGCTTCATGATCCAAATTTTCCTCAAATGCCATTTGGAATTCAGCAGCAAAGGCTGCCGGCACAAAACCACTTGTCTTTAAGCAATTTACTGTCTCAGGCTGCTGCTGATAACCCAAATAACCCTTTGACAGCGGAGAAGCTACTTTCTTCAGGTTTATCACAAGATCCTCAGATATTAAATATGTTGCAACAGCAGTACTTGTTGCAACTGCATTCTCAAGCGGCTGCTCAATCCCAGCAGATCCCCTTGATTGATAAACTCCTATTGCTGAAGCAACAACAGAAGCAGGAGGAGCAGCAGCAGCTGCTACGACAACAACAACAACTGCTTTCTCAAGTGTTGCAAGACCAACCGTCTAGCCAGCTCTTCAGCAATTTATCTTATGGACAGTTGCAAGGTGTATTACCAATAGGTAATTTGCGTGTGGATCCTTCTCTAGTTCAACCACAACAAGAGGTTTTTCCCATGAGCTCTCAGACACCAATCCCCAATGTGCATAATGAGCATAATTCTAATTCTTTGAATCTACCACCTAAAGTTAGTCAAGATACAAGTAGTAATGTAAGCAGCCAAGCTTCTGTACGTCTTCCACACCAATTATTTGGCGATGGTCATCCAGAAAATTGGGGCCCTAATTTTACTGAACAAATTGTCGATCAGCATCAGAAGGAATCATTTCCAGTATCATCAACTCAGGCTGATGGTTCTGCATTGCTTGAACAGAACAGATTCAAAGAGGAACCCCTCATTGCATCTCTTTCTCCTTCTGATTACGCCACCAAGTCAGTGGAACAGGTGCCACCCAGCAATTTTAGGCCTGATGGTGTGGTTGTGACCTCAACTTCTAAGCCTGGGGAAAGTTCTGGAAATGTGGAGTCTTTTGCATCCAGCATTGCCTTATCTACAACTGTATCTAATGTGTCACCACCAGTGAGTGGTACTGGTACGGAGGTGAAGACCAAATTGGATATTGTGCATCAAGAGCAACATGCTGGGAAGGACAGCACTGTATCCGAGCCATCTCTGGGAGACATAAGAAAGATTGAAGCTCAAGAACCTAAAAAGGCTAGTGAGAAGAAATCTAAGAAGCAAAAATCAACCAAATCTCAGTCTTTTGATCAAACAAAGGGAGTGGTAAAAAATTTGACTTTGCAGCCATCAAAGCAGTCAGAAACTGAAATGGCAAAGTTAAGTGATTTTAGGGAAGCTAAGATTGACGAATCGTTAAATGATACAAATATGCAACAAACAAGAGTTAAGGGAACTCGGACTGGAAGTGCTGTCTCTGAGACTGGTGATCACCAACATGCTGGTGGCTGGTCTGGTATTATTACTGGAAAGATAACTGAAACAGTTGGTGTAGGTGAGACCAATTCGACTACTTTTTTGACACAGAAAACTGAGGTACCTGCCGGACGAGCTTGGAAACCTGCTCCAGGTGTCAAACCGAAATCTTTCTTAGAAATTCAACAGGAAGAAAAAAGGAAGGCAGAGACTGAAACACTTGTATCTGATGTTGCTGTTTCTGTCAATTCAATGAGCCTAGCAACTCCTTGGGCTGGGATTGTGGTCAATCCTGACTCCTTGAAGTTATCTAGTGACAGTGTCAAAGAAGGAGGCAATACTGAGAATCATGTTAAATCTGAAACTTCTCAAAATGTCAAGAGCAAGAAAAGCCCTCTACACGATCTATTAGCCGAAGAAGTTCTAAAGAAATCTAATGAAATAGATGCTGAGGTTCCTGATAGTATATTGCCCTCACATAATATAGTTGTACAATCAGAATCATTGGATGACGGCCATTTTATTGAGGCGAAAGATACTAAAAGAAGCCGAAAAAAGTCCACAAAATCGAAGGGTTCAGGAACTAAAGCTTCATTGCCCATTGCATCATCTGATATACCTATAGCTTCAAGCCCCAATGAAAAGGGAAAAAACTCTCGCTTGGCACAGCAGGAAAAGGAACAGTTGCCTGTCATCCCTGCAGGACCCTCTTTCAGTGATTATGTTCTTTGGAAAGGAGAGCGAGAACCACCAAGCTCGTCTCCTTCTCCAGCATGGTCTACTGATTCCGGTAGGGTTCCAAAACCAACTTCATTGAGGGACATTCTAAAGGAACAGGAGAAAAAGTCCTCTTCTGCAATTCCTGTTAGCCCAGTGCCTCCGCCTCCAAAATCTCAGCCTACCCAGTCTACACGGAATAGTGCTTCTTCATGGTCAGTTTCAGCATCCTCTCCATCTAAAACTGCTTCTCCAATTCAGATAAATACCCAAGCTTCTCAATCAAAATACAAAGGAGAAGATGATTTGTTCTGGGGTCCAATGGAGCAATCTAAGCAAGATGCTAAGCAGTCTGATTTCCCTCAGCTTGCTAGCCAAGGGAGTTGGGGTTCAAAAAACGTAAGCTCGAAAGGTAATTCCCCCGGACTATTGACAAGACAGAAATCAGTGAGTGGTAAACAAGCTGAACGGTCTCTAGCATCATCACCGGCTTCTTCTCAATCAATGCTGAAATTGAAAAAAGATGCCATGACAAAGCATTCTGAGGCCACGGATTTCAGAGATTGGTGTGAGAATGAGTGTGTTAGGCTTATAGGGTCAAAAGATACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCGGAAGCTGAACTGCTCCTCATAGAAAACCTTGGATCATATGATCCTGACCATGAATTCATTGATAAGTTCCTGAATTACAAGGAGTTGTTACCATCGGATGTTTTGGACATAGCTTTTCAGAGTAGGAGTGACAAGAAAGTTGGTGGACAAGGTGCGGTATGGACAGCTTCAGCTAATGCAGATATGCAGGATGTTGACTTCACTGAAGGATCCTCTAAAGGTGGTGGAAAGAAGAAAGGTAAGAAGGGGAAAAAGGTGAGCCCTTCAGTTTTGGGATTTAACGTTGTGAGTAACCGTATCATGATGGGTGAGATCCAGACTGTAGAAGATTAA 5334 0.4387 MAEQRATSDNRHQLSVAPPLQISKDAQGSDNSIPLSPQWLLPKPGENKLGTGSVENHVVSNPPYGHRSETVKTSGNGEDVHDDHKKKDVFRPSMFDSESGRRDRWRDEERDTKSSIRKDRWRDGDKDLGDSRRVDRWTDNMSARNFAEARRGASDNHRWNDSGNRETNFDQRRESKWNTRWGPDDKEPEGIREKWSDSGKDGDIHLEKGNISSQGKDEKEGEHYRPWRPNYSQGRARVDPSHTTPNKPVSTFSYGRGRGENTPPVSSIGHGRTGSLASSLSSTYSGTALEKVQSGLEELNPFRYNRTKLLDVYRVTGMGTNRKLVDDFVQVPNLTQDEPLEPLAILAPNPEEVVVLNGIDKGEIISSTAPQVPKDGRSTDFTHTRRMKPGSAPFQDRGEDGGSYKVPEEVSSNKDSSFEGNTSVHPGASWRTMPLGDHAAQFHDGRDVTNDVRLRKTDLNSLQPKDPHNQWENNLGYLSDSKEVGKWQASEDPVIKRQLSGILDSELEIRRVQQTAPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSAADSPWLSLGDAMPHLRAKARPPPGFSTPKPNDFTDIPGRQISSTFGNTLTGLNELDILRSDSRHRPSPDTEAENRFLESLMSGSKNSPPLDGLALSEGLQGFVGNNPGNMGPSAVDNGNLYLLAKRMALERQRSLPSPYPYWPGRDAASFAPKPEVVPDASLHSKLLSSVSDNSRQPQSQNSELMSIIQGLSDRTSAGLNNGGAGWPNYPLQGALDPLQNKIDMLHDPNFPQMPFGIQQQRLPAQNHLSLSNLLSQAAADNPNNPLTAEKLLSSGLSQDPQILNMLQQQYLLQLHSQAAAQSQQIPLIDKLLLLKQQQKQEEQQQLLRQQQQLLSQVLQDQPSSQLFSNLSYGQLQGVLPIGNLRVDPSLVQPQQEVFPMSSQTPIPNVHNEHNSNSLNLPPKVSQDTSSNVSSQASVRLPHQLFGDGHPENWGPNFTEQIVDQHQKESFPVSSTQADGSALLEQNRFKEEPLIASLSPSDYATKSVEQVPPSNFRPDGVVVTSTSKPGESSGNVESFASSIALSTTVSNVSPPVSGTGTEVKTKLDIVHQEQHAGKDSTVSEPSLGDIRKIEAQEPKKASEKKSKKQKSTKSQSFDQTKGVVKNLTLQPSKQSETEMAKLSDFREAKIDESLNDTNMQQTRVKGTRTGSAVSETGDHQHAGGWSGIITGKITETVGVGETNSTTFLTQKTEVPAGRAWKPAPGVKPKSFLEIQQEEKRKAETETLVSDVAVSVNSMSLATPWAGIVVNPDSLKLSSDSVKEGGNTENHVKSETSQNVKSKKSPLHDLLAEEVLKKSNEIDAEVPDSILPSHNIVVQSESLDDGHFIEAKDTKRSRKKSTKSKGSGTKASLPIASSDIPIASSPNEKGKNSRLAQQEKEQLPVIPAGPSFSDYVLWKGEREPPSSSPSPAWSTDSGRVPKPTSLRDILKEQEKKSSSAIPVSPVPPPPKSQPTQSTRNSASSWSVSASSPSKTASPIQINTQASQSKYKGEDDLFWGPMEQSKQDAKQSDFPQLASQGSWGSKNVSSKGNSPGLLTRQKSVSGKQAERSLASSPASSQSMLKLKKDAMTKHSEATDFRDWCENECVRLIGSKDTSFLEFCLKQSRSEAELLLIENLGSYDPDHEFIDKFLNYKELLPSDVLDIAFQSRSDKKVGGQGAVWTASANADMQDVDFTEGSSKGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQTVED 1777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1405 1431 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1318 1343 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1130 1154 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 236 257 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 409 428 - -
Vian7g00805 1777 Coils Coil 873 897 - -
Vian7g00805 1777 ProSiteProfiles GYF domain profile. 519 570 IPR003169 GO:0005515
Vian7g00805 1777 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 58 64 IPR002052 GO:0003676|GO:0008168|GO:0032259
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1562 1626 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1 274 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1386 1548 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1318 1345 - -
Vian7g00805 1777 Gene3D - 504 585 IPR035445 -
Vian7g00805 1777 SMART gyf_5 520 575 IPR003169 GO:0005515
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1732 1754 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1514 1548 - -
Vian7g00805 1777 SUPERFAMILY GYF domain 513 576 IPR035445 -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1112 1180 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1155 1178 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1563 1624 - -
Vian7g00805 1777 CDD GYF 519 576 IPR003169 GO:0005515
Vian7g00805 1777 MobiDBLite consensus disorder prediction 150 226 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 1466 1480 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 7 36 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 72 139 - -
Vian7g00805 1777 Pfam GYF domain 524 568 IPR003169 GO:0005515
Vian7g00805 1777 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1777 - -
Vian7g00805 1777 MobiDBLite consensus disorder prediction 366 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00805 Vian-Chr7 16339149 16347185 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00805 7 16339149 16347185 Vian7g00805 7 16339149 16347185 ECH
Vian7g00805 7 16339149 16347185 Vian4g02310 4 39929890 39938225 PCT