Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00800 ATGAAATTGAAGTCTAAGAAAGGATGGAAGTCCGTTGTGGCTGTTCATTTGAAAGGAAAATCATCAACCCGTTTTTCTTTATTTCGCAAAGTGAATTCAGGTGGCCATGGACCGGGGAAAACACCAGTTTATCTGAATGTTTATGACTTGACACCCGTGAATGGTTATGTGTACTGGGCTGGTCTTGGTATATATCACTCTGGTGTAGAAGTTCATGGTGTAGAATATGCATTTGGAGCTCATGACTACCCAACAAGTGGTGTTTTTGAGGTTGAGCCTCGACAATGCCCTGGCTTCAAATTCAGGAAGTCAATACTCATAGGAACCACAACTTTGGATTCTACTCGGGTCAGGGAGTTCATGGAACGCCAGTCAGCAAACTACAATGGTGACACATATCACTTGATTGTTAAGAATTGCAACCACTTCTGCAAAGACATCTGTTACAAGCTGACGGGGAAATCCATTCCAACATGGGTAAATCGATTGGCCAGGCTAGGTTCAATTTGCAATTGCATACTCCCTGAAGCACTGAGGATTTCTGGTGTGGGGCATGATCCTAATTATGAGGCTGAAGACAATGAAAAGAGAAGGCTTCGAAGTGGCTTGAACTGCTTGTCCTCAATCTCCATGCGTCAGAAGCACCTCTCCACTTCTTCACTGTTTCTACAGTCACCATTAAGAGGCTGCTTGTCATCGTCATGGCCCTCCTGGGAATTGAGAAAATCCATTAACCGTTCCTTGAAGGAACGATAA 756 0.4392 MKLKSKKGWKSVVAVHLKGKSSTRFSLFRKVNSGGHGPGKTPVYLNVYDLTPVNGYVYWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSILIGTTTLDSTRVREFMERQSANYNGDTYHLIVKNCNHFCKDICYKLTGKSIPTWVNRLARLGSICNCILPEALRISGVGHDPNYEAEDNEKRRLRSGLNCLSSISMRQKHLSTSSLFLQSPLRGCLSSSWPSWELRKSINRSLKER 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00800 251 SMART DUF862_2a 41 179 IPR008580 GO:0008233
Vian7g00800 251 Pfam PPPDE putative peptidase domain 42 176 IPR008580 GO:0008233
Vian7g00800 251 ProSiteProfiles PPPDE domain profile. 41 178 IPR008580 GO:0008233
Vian7g00800 251 PANTHER DESUMOYLATING ISOPEPTIDASE 39 220 IPR008580 GO:0008233
Vian7g00800 251 Gene3D PPPDE domains 37 183 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00800 Vian-Chr7 16310953 16311935 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00800 7 16310953 16311935 Vian7g00800 7 16310953 16311935 ECH