Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00793 ATGGAGTCCATGGTTCGGTGCTATAGTTCGTGCGCGTTATTCGGATTTCGTTGCAACCTTCGATTCGCCGTTGTTGTTTTCGAGATTGTATTGATATTGGCATGGTTGGAAGTCTATAATGCAAAGCTCCCAGAACACGGATTTCATGGGGGAGGTTTGGAAGGGAGGAGTGAGAACATTGCCTCACACTCTTGCATACATGACCAGATACTTGAACAGAGAAAACGACCTGGTCGAAAGGTGTATTCCGTTACCCCACAGGTTTACAAGCCTGGTCTTTCGAAACGCCTCCAGCTTAAAGGTAGAGCGTTGCTTGGTATATCAACATCATCAGAGCTTCTAGGGATTGAAAAGCAACCTATTAGGATATATCTAAATTATGATGCAGTTGGTCACTCCCCTGACAGGGATTGCCAAAAGATTGGTGATATTGTCAAGCTTGGGGAGCCTCCCATAACTTCTCTTCCTGGTTTGCCTTCCTGTAATCCTCTTGCTGATCCTCCAGTCTCTGGCGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAGGACAAAAAACATCGCCTTCGTAAGGCATTAGGTCAGTCAGCTGACTGGTTTAGAAGGGTATTGTCTGTGGAGCCTGTGAAGGGGAACTTGCGATTAAGTGGATACTCTGCATGTGGACAAGATGGAGGTGTGCAGCTCCCTCATGCATATGTTGAAGAGGGAGTCTCTGATGCCGACTTGGTTCTCTTGGTGACTACAAGACCTACTACTGGGAATACACTTGCTTGGGCTGTGGCATGCGAACGGGACCAATGGGGTCGTGCTATAGCTGGACATGTTAATGTTGCTCCACGTCATTTGACAGCTGAGGCAGAGACTTTGCTATCAGCTACTTTGATACATGAGGTTATGCATGTTCTTGGTTTCGATCCACATGCCTTTACTCATTTTAGAGATGAAAGGAAAAGACGCCTTGACAAGGTTACTGAACAAGTTATGGATGAAAAGATTGGGCGGATGGTAACACGAGTGGTACTTCCACGTGTTGTCATGCATTCTCGGCATCATTATGCAGCATTTTCAGGAAATTTTACTGGCTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCACTGGGAAAAGAGGCTTCTGATGAATGAGATCATGACTGGTTCTGTGGATACAAGATCTGTAGTTTCAAAAATGACACTAGCTCTATTAGAAGACAGCGGATGGTACAAAGCCAATTATAGTATGGCAGACCAACTTGATTGGGGTCGGAACCAGGGTACTGAGTTTGTTACCTCCCCTTGCAATCTATGGAAAGGGGCCTATCATTGCAACACAACACAATTCTCGGGTTGTACTTATAACAGAGAGGCAGAGGGTTACTGTCCAATTCTAACCTACAGTGGAGATCTTCCTCAGTGGGCTCGGTATTTTCCTCAAGCTAATAAAGGTGGACAATCCTCATTGGCTGATTATTGCACTTATTTTGTGGCATACTCTGATGGATCATGTACAGACACTAGCAGTGCACGAGCACCTGATAGCATGCTAGGTGAAATTCGAGGAAGTAACTCCAGGTGCATGGCCTCATCGTTGGTGCGCACAGGATTTGTCCGGGGTTCTCTGACCCAGGGAAATGGCTGTTATCAGCACAGGTGTATCAACAATTTTCTAGAGGTTGCTGTGGATGGTGTCTGGAAAGTGTGTCCTCAGGCTGGTGGACCCATTCAGTTCCCTGGCTTTAATGGGGAATTAATCTGCCCTGCATATCATGAGCTCTGTAACACGGATCCAGTGGTTGTGTCTGGGCAATGTCCCAGTGCATGTAATTTCAATGGAGATTGTGTTGATGGAAGGTGTCACTGCTTTCTTGGATTTCATGGTCATGATTGCAGTAGACGTTACTGTCCCAGCAATTGCTCTGGCAAGGGGGTGTGCCTCACCAGTGGAATATGTGAATGTAAAACTGGCTATACTGGCATTGACTGTTCCACTGCTGTTTGTGATGAGCAGTGCAGTCTTCATGGTGGAGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTATGCGGGATATACTTGCCAGAACAGCTCCAGGCTCCTCTCCAGTCTTTCAATTTGCAGAAATGTGCTGGGAAATGATATTTCCGGACAACATTGTGCACCCAGTGAACCTAGCATACTTCAGCAGCTAGAAGAAGTGGTTGTGATGCCCAACTACCATAGATTATTCCCTGGTGGTGCTAGGAAACTATTTAATATATTTGGCAGTACGTACTGTGATGAGGCTGCCAAAAGGCTTGCCTGCTGGATCTCAATCCAAAAGTGTGAGAAGGATGGAGACAACAGGCTACGAGTATGTCATTCTGCATGTCAGGCTTATAATCTAGCATGTGGAGCTTCACTGGACTGCGGTGACCAAACCCTTTTCAGCAGCGAGGGGGAGGGGGAGGGTCAGTGCACTGGCTCTGGTGAGATGAAATTGTCATGGTTTAATCGACTAAAAAATAGTTTTTCTTTGAGAAATAGTTCCTCAAAAGTGATATCTATAACAAGATATAGGCAGCTTTAG 2589 0.4585 MESMVRCYSSCALFGFRCNLRFAVVVFEIVLILAWLEVYNAKLPEHGFHGGGLEGRSENIASHSCIHDQILEQRKRPGRKVYSVTPQVYKPGLSKRLQLKGRALLGISTSSELLGIEKQPIRIYLNYDAVGHSPDRDCQKIGDIVKLGEPPITSLPGLPSCNPLADPPVSGDCWYNCTSEDISGEDKKHRLRKALGQSADWFRRVLSVEPVKGNLRLSGYSACGQDGGVQLPHAYVEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFTHFRDERKRRLDKVTEQVMDEKIGRMVTRVVLPRVVMHSRHHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADQLDWGRNQGTEFVTSPCNLWKGAYHCNTTQFSGCTYNREAEGYCPILTYSGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTSSARAPDSMLGEIRGSNSRCMASSLVRTGFVRGSLTQGNGCYQHRCINNFLEVAVDGVWKVCPQAGGPIQFPGFNGELICPAYHELCNTDPVVVSGQCPSACNFNGDCVDGRCHCFLGFHGHDCSRRYCPSNCSGKGVCLTSGICECKTGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSRLLSSLSICRNVLGNDISGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCEKDGDNRLRVCHSACQAYNLACGASLDCGDQTLFSSEGEGEGQCTGSGEMKLSWFNRLKNSFSLRNSSSKVISITRYRQL 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00793 862 FunFam Teneurin transmembrane protein 2 608 638 - -
Vian7g00793 862 ProSitePatterns EGF-like domain signature 1. 656 667 IPR000742 -
Vian7g00793 862 FunFam SD03917p 597 639 - -
Vian7g00793 862 PRINTS Leishmanolysin (M8) metalloprotease family signature 402 431 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Vian7g00793 862 PRINTS Leishmanolysin (M8) metalloprotease family signature 249 278 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Vian7g00793 862 ProSitePatterns EGF-like domain signature 2. 656 667 IPR000742 -
Vian7g00793 862 Gene3D - 117 304 - -
Vian7g00793 862 Gene3D Leishmanolysin , domain 2 313 439 - -
Vian7g00793 862 FunFam leishmanolysin-like peptidase isoform X2 315 439 - -
Vian7g00793 862 Pfam EGF-like domain 640 667 IPR013111 -
Vian7g00793 862 Gene3D Laminin 640 670 - -
Vian7g00793 862 FunFam leishmanolysin-like isoform X2 503 598 - -
Vian7g00793 862 Gene3D Leishmanolysin domain 3 443 501 - -
Vian7g00793 862 FunFam leishmanolysin-like peptidase isoform X2 442 501 - -
Vian7g00793 862 ProSiteProfiles EGF-like domain profile. 636 668 IPR000742 -
Vian7g00793 862 FunFam Peptidase M8, leishmanolysin 115 304 - -
Vian7g00793 862 Gene3D - 597 639 - -
Vian7g00793 862 SMART egf_5 639 668 IPR000742 -
Vian7g00793 862 SMART egf_5 608 636 IPR000742 -
Vian7g00793 862 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 58 820 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Vian7g00793 862 Pfam Leishmanolysin 175 600 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Vian7g00793 862 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 119 602 - -
Vian7g00793 862 Gene3D Leishmanolysin domain 4 503 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00793 Vian-Chr7 16210051 16217567 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00793 7 16210051 16217567 Vian7g00793 7 16210051 16217567 ECH
Vian7g00793 7 16210051 16217567 Vian4g02297 4 39795334 39803158 PCT