Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00782 ATGGCGAAATCGAGCGCCGATGACGGCGACCTCCGGCGAGCTTGCGAAGCCGCAATTGAGGATACCAAGCAGAAGATCGTGATGGCGCTTCGGGTCGCCAAGGGTCACGGCATCTTAGGAAAATCGTCCAAGCTCGGTCGCCAAATGGCCAAGCCTAGGGTTCTCGCTCTCTCCACAAAATCGAAGGGTCAGAGGACATCGGCTTTTCTTCGCGTATTGAAGTATTCTACGGGAGGAGTTCTTGAACCTGCAAAGCTATACAAGCTGAAGCATCTGTCAAAAGTGGAAGTTGTAGCAAATGATCCCAGTGGATGTACATTTACTCTGGGATTTGATAACCTTAGAAGCCAGAGTGTGGCTCCTCCTCAATGGACCATGCGCAATATTGATGACAGGAATCGCCTTCTTCTTTGCATCTTGAACATATGCAAAGATGTTTTGGGTCGCCTTCCGAAGGTTGTCGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCCGCCGTCCCTGCTCAGAATAAAGTACGAGATGGTGGTCCTGTTGCATCATCTGTTGTGAGGGAGACAGAATTAAAAGTTAATGTTGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATGGAAGCTCTTTTGGGAACTTATGTGATGGGTATAGGTGAAGCAGAAGAATTTTCTGAAAGGTTGAAGAGGGAGCTCCAGGCTCTCGAAGCAGCAAATGTGCATTCTCTTTTAGAAAGTGAACCTTTGATGGATGAGGTTATGCAAGGGCTTGAAGCAGCGACCAGTGTTGTGGAAGATATGGATGAATGGTTAAGCATATTCAATGTAAAACTCCGGCACATGAGGGAGGATATTGCATCAATAGAAACCCGTAATAACAATCTGGAAATGCAATCAGTTAATAACAAATCTCTCATTGAAGAGCTTGATAAGCTTCTTGAGCGGTTGCGTGTCCCTTCTGAGTATGCTGCAAGTTTGACAGGAGGTTCATTTGATGAAGCTCGAATGCTTCAAAATGTTGAGGCATGTGAATGGTTGACTAGTGCCTTGCGTGGCCTTGAAGCACCTAATCTAGACCCTAGTTATGCAAACATGAGAGCTGTTAAAGAAAAGCGTGCAGAACTTGAAAAATTAAAATCTACTTTTGTCAGGAGAGCATCTGAATTCTTGAGAAATTATTTTGCTAGCTTGGTGGACTTCATGATAAGTGATAAAAGCTACTTTTCCCAGCGAGGACAGTTAAAGAGGCCTGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTGCAACATTTGAAGAGTCTTGACAAGAATTGCTTGGGTCCGCTGAGAAAAGCTTACTGCAGTTCTCTAAACTTGCTTCTTCGTAGGGAGGCCCGTGAGTTTGCAAATGAGCTTCGTGCTAGTACTAAAGCATCTAGAAATCCAACTGTTTGGCTCGAAGGTTCTTCAGGTTCTGGTCAAAATGTAAATGCTACAGACACTTCCACAGTTTCTGATGCTTATGCGAAGATGCTTACAATTTTTATTCCACTTCTGGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTTGAAGTCCCTACACTCGTTCCTCCTGGAGGTGTTGTTAATGGAAACAAAACTGGATATGATGATGATGATGATGATTTGGGAATTATGGACATTGATGAGAATGACAGCAAATCTGGTAAAACTTCTGCTGAGCTTGAAGCTTTGAATAAATCACTTAAGGATTTACTTGATGGAATACAAGAAGACTTTTATGCTGTTGTGGATTGGGCATACAAGATTGATCCTCTACGCTGTATATCAATGCATGGAATAACAGAGCGTTATCTATCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGTGATTTACTTCGTGACCTGGAGTCTCGGATATCTATGCAGTTCAACCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGAAATGAAAAGAATATTCGCCAAATGGGTGTCCTCTCATATATTCCCAGATTTGCAACCCTTGCAACTCGGATGGAGCAGTACATCCAGGGTCAGTCTAGGGATTTGGTTGACCAAGCATATACAAAATTTGTTAGCATAATGTTTGCTACTTTAGAAAAAATTGCTCAAACAGAACCAAAGTATGCAGATATTTTTCTTTTTGAGAACTATGCTGCCTTTCAGAATAGTTTGTATGACCTCGCCAACATTGTGCCCACTTTGGCCAAATTTTATCATCAGGCCAGTGAAGCCTATGAACAAGCTTGTACACGTCATATTAGCATGATAATATACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAGGATTGAGGACTTGATGTTCACTGTTCCACCTGAAGAGATTCCTTTTCAGCTTGGACTGTCAAAAATGGATCTTCGGAAGATGTTAAAATCCAGTTTATCTGGGGTGGACAAGTCCATTGCTACGATGTATAAGAAACTGCAAAAGAACTTGACTTCAGAGGAACTATTACCCTCTTTATGGGACAAATGCAAGAAGGAGTTTCTTGATAAGTACGAAAGTTTTGCCCAACTTGTGGCTAAGATTTACCCTACGGAGACCATCCCATCTGTTGCAGAGATGAGAGACCTTTTAGCTTCCATGTAG 2658 0.427 MAKSSADDGDLRRACEAAIEDTKQKIVMALRVAKGHGILGKSSKLGRQMAKPRVLALSTKSKGQRTSAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVVANDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILNICKDVLGRLPKVVGIDVVEMALWAKENTPAVPAQNKVRDGGPVASSVVRETELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEEFSERLKRELQALEAANVHSLLESEPLMDEVMQGLEAATSVVEDMDEWLSIFNVKLRHMREDIASIETRNNNLEMQSVNNKSLIEELDKLLERLRVPSEYAASLTGGSFDEARMLQNVEACEWLTSALRGLEAPNLDPSYANMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSSGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKTGYDDDDDDLGIMDIDENDSKSGKTSAELEALNKSLKDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRDLLRDLESRISMQFNRFVDEACHQIERNEKNIRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTEPKYADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMFTVPPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIATMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKIYPTETIPSVAEMRDLLASM 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00782 885 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
Vian7g00782 885 Coils Coil 282 319 - -
Vian7g00782 885 Coils Coil 576 596 - -
Vian7g00782 885 PANTHER SEC3/SYNTAXIN-RELATED 49 878 - -
Vian7g00782 885 Pfam Exocyst complex component Sec3 580 868 IPR019160 GO:0000145|GO:0006887
Vian7g00782 885 Pfam Exocyst complex component Sec3 225 485 IPR019160 GO:0000145|GO:0006887
Vian7g00782 885 Coils Coil 222 249 - -
Vian7g00782 885 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
Vian7g00782 885 Coils Coil 189 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00782 Vian-Chr7 16094991 16109944 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00782 7 16094991 16109944 Vian7g00782 7 16094991 16109944 ECH
Vian7g00782 7 16094991 16109944 Vian4g02292 4 39749627 39764516 PCT