Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00776 ATGTTCACCAATTCACATACGCTAATGCAAACTTTGTTGTCATCTTTGCCGGAGCCAGACCTCTCCTTGAACATAAGCCCTCCCTCTATTTCTGAGGTCAAGGAAGTGGGGTGTTTCGGCAAAGTGATTTACAGCGACATGTGTTCAACTTCTGATTCTGGGAGCAGTGGAGGAAGTGATTTGAGCCATGAGTTCCATAACCTTGGTCACCATCGTGAGCCCACGTTGAAGTTAGGCTTTGGAACAATGGATTTGAATCCTCGCCATCATCAGGTTCATGGTGACACCAGAAGCTTCACTCACCATAACCACCACCACCACCACCACCACCACCTTCAGCCTCACATCTACGGCCGCGATTTCAAACGAACTGCAAGAGTCGTCAATGGCGTCAAAAGAAGCGTCAGGGCTCCTCGGATGAGATGGACCACCACCCTCCATGCCCATTTTGTTCACGCGGTTCAACTTCTTGGCGGCCATGAAAGAGCAACTCCGAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCCCACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCACCACAGGTCATGGGCAGACAGATATTGCAGTATTGAATCCAAGGCAAGGGATTAACATTGTTCATCTGCATGCACCTTCACCCAATTTACCAGACCCGATTCAAAGTTCCCACAGGACAGCGTGGCAACAATCATCAATAGAGACAAAAACAAAGAACAGTAGACAAGAAGCAGAGATGGGTTTGACGTATTGTGAGGTGAAGGGAAGTGAAAGCATGGTGAATGGCTTGGATTCTACCAGTTTGTCACGTTCCGAGGGAATGCTTGACCTAGAATTCACCCTTGGAAGACCCATTTGGCAAAAAGACCACGCAGAATCATCCAGAGAGTTAACTCTTTTAAACTGCTGA 945 0.472 MFTNSHTLMQTLLSSLPEPDLSLNISPPSISEVKEVGCFGKVIYSDMCSTSDSGSSGGSDLSHEFHNLGHHREPTLKLGFGTMDLNPRHHQVHGDTRSFTHHNHHHHHHHHLQPHIYGRDFKRTARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTTGHGQTDIAVLNPRQGINIVHLHAPSPNLPDPIQSSHRTAWQQSSIETKTKNSRQEAEMGLTYCEVKGSESMVNGLDSTSLSRSEGMLDLEFTLGRPIWQKDHAESSRELTLLNC 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00776 314 SUPERFAMILY Homeodomain-like 135 192 IPR009057 -
Vian7g00776 314 Gene3D - 137 194 - -
Vian7g00776 314 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 19 302 IPR044847 GO:0000976|GO:0006355|GO:0010158
Vian7g00776 314 FunFam Myb family transcription factor 136 194 - -
Vian7g00776 314 NCBIfam myb-like DNA-binding domain, SHAQKYF class 138 191 IPR006447 GO:0003677
Vian7g00776 314 Pfam Myb-like DNA-binding domain 139 190 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00776 Vian-Chr7 16026977 16030154 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian7g00776 Myb_DNA-binding 1.3e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00776 7 16026977 16030154 Vian7g00776 7 16026977 16030154 ECH
Vian7g00776 7 16026977 16030154 Vian4g02283 4 39654911 39659056 PCT