Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00771 ATGGCCCTTACGGACCTATTCACCGGAGAGATAGCCTCCGATCTCTGGAAAATGCTCATCACAATTTCCCGAAAGGCCCTGCGCTGCAAGTCCAGCGCGGAGCAACTCATCACCTACGTGCGCGAGATTCTTCCCACCATCGAGGAAATCAAGTACTCCGGGGTGGAGCTTCCGGCGCCGAGGCAGTCTCAGCTGGACCGCCTGTCGGAGATTCTGCGTTCCGGCGTGGAGCTTTCGCACCAGGCGCTGTCCTCCAGCCGCTGGAACGTGTACCGGAACTTCCAGCTGGCGAAGAAGATGGAGAAGCTGGAGAAGCACGTGACGAGGTTCCTGCAGGTGCCCATGCAGGCGCACATACTGGCCGACGTGCATCACGTGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGTCGAACCGGCGGATGGAGCGGTTTCTGGAGGAGATGAAGATCGGAGTGAACGGCGGTGGGTGGGTGGAGGAGGCTGTGAAGAGCATGCAGGAAGATGAGACGTGGGTGGAAGGTTGTAACGGGAATAACGGTTTCGGTGTTGGGTTGGATTTCGGGAAGAAGAATGTTATGGAGATGGTTTTCTCTAATAATGATGCTGATTGGATTGTCGGGATTTGTGGGATTGGTGGCTCCGGGAAAACCACCCTTGCCAGAGAGCTCTGCAGAGACGACCAAGTCCGATGTTATTTCAAGGACAGGATTTTGTTTTTGACCGTGTCACAGTCTCCGAATGTGGAGCAGCTGAGAGCGAGGATCTGGGGACACATCATGGGCAACCAAGGCTTGAATGGAAATTACGAGGTTCCGCAATGGATGCCACAGTTTGAGTGCAAAGGGGAAGCTCAAGCTCTTGTTGTTCTTGATGATGTGTGGTCTTTCTCCGTGCTGGAGCAGCTTGTGTGGAAAATCCCTGGCTGCAAATTCCTTGTGGTGTCTCGATTCAGGTTCCCAACATTCTTTAGTGCCACTTATCACGTGGAATTGCTGGGTGAAGAGGATGCCCTCTCTTTGTTTTGCCACCATGCTTTTGGACAGAAGTCAATTCCTTTGGGTGCTAATGTGAGTTTGGTGAAGCAGGTTGTGGCTGAGTGTGGAAAACTTCCACTGGCTCTGAAGGTGATTGGAGCTTCTTTGCGAGACCAGAATGAAATGTTTTGGCTGAGTGTTAAGAGTAATCTGTCTCAAGGTCACAGCATTGGTGAGTCCTATGAGATCAATCTGATTGATAGAATGGCAATTAGTACAAACTACCTGCCAGAAAAGATCAAGGAGTGCTTCTTGGACCTGTGCTCTTTCCCTGAGGATAGAAAGATCCCTCTCGAAATTCTAATTAATATGTGGGTTGAAATCCATGACATTCGTGAGGCGGAAGCATATGCCATTGCGGTTGAGCTTTCGAATAAGAACCTTCTAACCTTAGTGAAAGAAGCACGTGCCGGGGGCATGTATAGTAGCTGCTTTGAGATTTCTGTGACTCAGCATGACACACTGAGAGACCTTGCTCTTATATTGAGCAAGCGCGGGAGCATTCATGAACACAGAAGGTTGGTCATGGCACAACGAGAAGAAAATGGACTACTCCCAAGAGAATGGTCAAGATACCAGGACCGACCCTTTGAAGCTCAGATTGTTTCAATCAACACAGGGGAAATGACAGAAATGGATTGGTTTGAGCTGGATTTTCCCAAGGCTGAAGTGTTGATAATCAATTTCACGTCCAGTGATTACTTTTTACCTCCCTTCATCAGTAAGATGCCAAATTTGAGGGCACTGATAATAGTAAACTACAGTACCTCATATGCTCGCCTTCACAATGTTTCAGTTCTTAGGAATTTGACCAACTTGAGGAGTCTCTGGCTAGAAAAGGTTTCCACCCCTCAGTTGTCAGGCACTGTCTTGAAAAACTTGAGCAAACTATTCGTAGTCCTCTGCCAGATTAACAACAGTTTGGATGGAAAACAGTTCCCTAACCTCTCTGAGCTGACACTTGATCACTGTAATGATCTAACATACTTGCCCTCAAGCATTTGTGGAATAAAGTCACTCAGAAACATGAGCCTCACAGACTGCCACAATTTGTCTGAACTACCTGTTGAATTTGGCAATCTAAAATCTCTAGAGATCCTCCGTTTATATGCTTGTCCTGATCTAGAAACACTTCCTCCTAGCATGTGTGAAATGAAGAAATTGAAGTACATTGACATTTCTCAGTGTACTAACCTCACCTGCTTCCCTAAAGAGATTGGTAGATTAGTAAGTTTAGAGAAGATTGACATGAGGGAATGCCCCATGATTAGGTATTTACCAAAGTCTGCAGTGTCATTACACTCTCTGCAGCTTGTAATTTGTGACGAGGAGGTGTATGGTACATGGAGAGATGTTGCTGAGATGGCCAAGTCAAATGTTCACATTCAAGTACCAGAACAACACTTTGATCTGGACTGGCTTCAAGAATGA 2475 0.4764 MALTDLFTGEIASDLWKMLITISRKALRCKSSAEQLITYVREILPTIEEIKYSGVELPAPRQSQLDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTRFLQVPMQAHILADVHHVRFEMAERFDRVEASNRRMERFLEEMKIGVNGGGWVEEAVKSMQEDETWVEGCNGNNGFGVGLDFGKKNVMEMVFSNNDADWIVGICGIGGSGKTTLARELCRDDQVRCYFKDRILFLTVSQSPNVEQLRARIWGHIMGNQGLNGNYEVPQWMPQFECKGEAQALVVLDDVWSFSVLEQLVWKIPGCKFLVVSRFRFPTFFSATYHVELLGEEDALSLFCHHAFGQKSIPLGANVSLVKQVVAECGKLPLALKVIGASLRDQNEMFWLSVKSNLSQGHSIGESYEINLIDRMAISTNYLPEKIKECFLDLCSFPEDRKIPLEILINMWVEIHDIREAEAYAIAVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDTLRDLALILSKRGSIHEHRRLVMAQREENGLLPREWSRYQDRPFEAQIVSINTGEMTEMDWFELDFPKAEVLIINFTSSDYFLPPFISKMPNLRALIIVNYSTSYARLHNVSVLRNLTNLRSLWLEKVSTPQLSGTVLKNLSKLFVVLCQINNSLDGKQFPNLSELTLDHCNDLTYLPSSICGIKSLRNMSLTDCHNLSELPVEFGNLKSLEILRLYACPDLETLPPSMCEMKKLKYIDISQCTNLTCFPKEIGRLVSLEKIDMRECPMIRYLPKSAVSLHSLQLVICDEEVYGTWRDVAEMAKSNVHIQVPEQHFDLDWLQE 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00771 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Vian7g00771 824 Gene3D - 334 413 IPR042197 -
Vian7g00771 824 Gene3D Ribonuclease Inhibitor 542 807 IPR032675 -
Vian7g00771 824 Gene3D - 180 322 IPR027417 -
Vian7g00771 824 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 822 IPR039203 GO:0050832
Vian7g00771 824 Pfam NB-ARC domain 194 414 IPR002182 GO:0043531
Vian7g00771 824 PRINTS Disease resistance protein signature 731 747 - -
Vian7g00771 824 PRINTS Disease resistance protein signature 283 297 - -
Vian7g00771 824 PRINTS Disease resistance protein signature 370 384 - -
Vian7g00771 824 PRINTS Disease resistance protein signature 208 223 - -
Vian7g00771 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 435 IPR027417 -
Vian7g00771 824 Gene3D - 415 506 IPR036388 -
Vian7g00771 824 SUPERFAMILY RNI-like 568 786 - -
Vian7g00771 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00771 Vian-Chr7 15961439 15964769 Dispersed/Tandem